Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00531 ATGTCCTTAATAGCAGAAGCACCTAACTTTCTTCAAGTTTATTCTGATGGTTCTGTGAAACGTTTTGACCCTGAAATTGTCCCAGCTTCTATAGAACCAACCAATGGATACAAATCCAAGGATGTGATCATAGACTCATCAAAACCTATCACTGGAAGAATCTTCATTCCAAATTCTCCCACTTCCTCAAAGAAACTTCCTCTCTTAGTTTATTTCCATGGTGGTGGATTTTGCATTGGCTCCACAACATGGCTAGGTTACCACAATTTTCTTGGTGACTTCTGCGTCACATCTCAATCCATTGTTCTTTCTGTTGATTACCGTTTGGCACCAGAACATCGCCTTCCTATAGCTTATGAAGATTGTTACACTTCACTTCAATGGGTTGGTGATCAAGTTTGTTGTGAACCCTTGTTTCAACAAGTTGACCTAACTAGAGTGTTTCTCTCAGGAGACAGTGCTGGAGGTAACATTGCACACCATGTTGCTGTGAAGGCAATTCAAGACAATGGCTGTGACCCTTTGAAAATTAAAGGGCTAATGCTCATACACCCTTACTTTGGAAGTGAGAAAAGGACTGAGAAAGAGATGGCTGAGGAAAGTGTAGAGGATGTGGCCATGAATGATATGCATTGGAGGCTAAGTATACCACAAGGGCTAAATCGTGACTATTTTGGATGTAATTTTGAGAAAGTGGACATGTCTAACAGTGTGTGGTCTAAATTCCCAGCCATTGAGGTTTATGTTGCTGGTAAGGATTTTTTGAAGGAAAGGGGAGTAATGTATGTAGAGTTTTTGAAGAAGAATGGGGTAAAAGAGGTGGAGATTGTGGAGGCAAAGGAAGAGTCCCATGTATTTCATGTATTTTATCCTCAATCTTGTGCAACTCGCTTACTCCAAAGCCAAATGACTCGATTCATGGAGAAATATTAG 933 0.4051 MSLIAEAPNFLQVYSDGSVKRFDPEIVPASIEPTNGYKSKDVIIDSSKPITGRIFIPNSPTSSKKLPLLVYFHGGGFCIGSTTWLGYHNFLGDFCVTSQSIVLSVDYRLAPEHRLPIAYEDCYTSLQWVGDQVCCEPLFQQVDLTRVFLSGDSAGGNIAHHVAVKAIQDNGCDPLKIKGLMLIHPYFGSEKRTEKEMAEESVEDVAMNDMHWRLSIPQGLNRDYFGCNFEKVDMSNSVWSKFPAIEVYVAGKDFLKERGVMYVEFLKKNGVKEVEIVEAKEESHVFHVFYPQSCATRLLQSQMTRFMEKY 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00531 310 Gene3D alpha/beta hydrolase 6 308 IPR029058 -
Cca05g00531 310 SUPERFAMILY alpha/beta-Hydrolases 17 309 IPR029058 -
Cca05g00531 310 PANTHER ARYLACETAMIDE DEACETYLASE 5 307 - -
Cca05g00531 310 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 IPR033140 -
Cca05g00531 310 PANTHER CARBOXYLESTERASE 13-RELATED 5 307 - -
Cca05g00531 310 Pfam alpha/beta hydrolase fold 69 287 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00531 Cca-Chr5 11998582 11999548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00531 3 306 Carbohydrate Esterase AT5G16080 36.792 1.48e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00531 - - gmx:106796748 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00531 05 11998582 11999548 Cca05g00531 05 11998582 11999548 ECH