Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00513 ATGTTTGTCCTAGAAAATGGTGCCAACAAGGGTGAAGATTCAAGGCTTCAAGCAATCTCCGAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGGATAATGTTTCAAGACATAACAACATTGTTGTTGGATCCCAAGGCGTTTAAAGACACGGTTGACATTTTTGTTGATCATTACAGAGACATGGATATTTCTGTTGTGGCTGGAGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCTATAGGCATTGGTGCCAAGTTTGTTCCCTTATGCAAACCTGGAAAGCTACCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGTTTGGAGATGCATGTTGGTGCTGTCGAGCCCTGTGAACGGGTCATAATTATGGATGATTTGGTGGCTACAGGTGGAACTCTGTCAGCAGCAATTAGACTTTTAGAACGTGCTGGTGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTTTCTGATCTTAAGGTACGCCGCAAGCTTAATGGAAAGCCACTTTATATACTTTTGGAGCCACGTCAAGTAGAAAATGGTTTTTGA 582 0.4244 MFVLENGANKGEDSRLQAISEAIRVVPHFPKQGIMFQDITTLLLDPKAFKDTVDIFVDHYRDMDISVVAGVEARGFIFGSSIAIGIGAKFVPLCKPGKLPGEVISEKYVLEYGTDCLEMHVGAVEPCERVIIMDDLVATGGTLSAAIRLLERAGAEVVECACVIGLSDLKVRRKLNGKPLYILLEPRQVENGF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00513 193 Gene3D - 7 186 IPR029057 -
Cca05g00513 193 SUPERFAMILY PRTase-like 22 178 IPR029057 -
Cca05g00513 193 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 12 190 - -
Cca05g00513 193 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 12 190 - -
Cca05g00513 193 CDD PRTases_typeI 53 185 IPR000836 -
Cca05g00513 193 TIGRFAM apt: adenine phosphoribosyltransferase 20 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Cca05g00513 193 Hamap Adenine phosphoribosyltransferase [apt]. 19 186 IPR005764 GO:0003999|GO:0005737|GO:0006168
Cca05g00513 193 Pfam Phosphoribosyl transferase domain 58 164 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00513 Cca-Chr5 11564174 11567859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00513 12 185 PRT Gene Family AT1G27450 68.391 5.84e-84 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00513 K00759 - gmx:100775389 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00513 05 11564174 11567859 Cca05g00513 05 11564174 11567859 ECH
Cca03g01581 03 34571007 34575136 Cca05g00513 05 11564174 11567859 ECH
Cca05g00513 05 11564174 11567859 Cca03g01581 03 34571007 34575136 PCT