Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00510 ATGGGCCGTATTGCAAGCAGTACACGCCGTTCTGCTTGTAGAACGGGCCATTCTAGGGCTGTTCCAGACTCAAATTCGCCCAACAACAACGAAATAAGAGACATGAGAAGAGAATGTTACCTTGATGTTGTATTCTTCGGAGAAAATGACAAGGCACAAGCCAAGCCCCTATTAGTGAATGGACTATCATATTCTTTCTATTCCAAAACCTGTCCCAATCTTGAAACCATTGTGAGAAACCATCTCAAGAAGGTGTTCACGCGAGCTAATTGGCAAGCTCCAGCCTTACTCGTCATTTTCTTCCATGATTGTTTTGTTCAGGGATGTGATGGGTCGTTGCTGCTGGATGGGAATCCAGGTGAAAGGGATAATCCACTGAACCGTGGAATAAGCCATAAAGCAGTGCAAACCATTGATGATATAAGGGAAGTTGTCCAAAAGGAGTGTGGAAGGGTCGTTTCTTGCGCAGATATCACTGTCTTGGCTGCTCGTGATGCTGTTTTCCTAgccgttcctaaactggaatag 528 0.4318 MGRIASSTRRSACRTGHSRAVPDSNSPNNNEIRDMRRECYLDVVFFGENDKAQAKPLLVNGLSYSFYSKTCPNLETIVRNHLKKVFTRANWQAPALLVIFFHDCFVQGCDGSLLLDGNPGERDNPLNRGISHKAVQTIDDIREVVQKECGRVVSCADITVLAARDAVFLAVPKLE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00510 175 Gene3D - 62 174 - -
Cca05g00510 175 PANTHER PEROXIDASE 41 169 - -
Cca05g00510 175 PANTHER PEROXIDASE 25-RELATED 41 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00510 175 ProSiteProfiles Plant heme peroxidase family profile. 61 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00510 175 PRINTS Haem peroxidase superfamily signature 93 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00510 175 PRINTS Haem peroxidase superfamily signature 153 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00510 175 SUPERFAMILY Heme-dependent peroxidases 57 170 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca05g00510 175 MobiDBLite consensus disorder prediction 1 31 - -
Cca05g00510 175 Pfam Peroxidase 78 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00510 175 MobiDBLite consensus disorder prediction 1 29 - -
Cca05g00510 175 PRINTS Plant peroxidase signature 133 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00510 175 PRINTS Plant peroxidase signature 71 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00510 175 PRINTS Plant peroxidase signature 95 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00510 175 PRINTS Plant peroxidase signature 152 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00510 Cca-Chr5 11510388 11514888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00510 58 170 Peroxidase AT1G71695 51.724 1.10e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00510 K00430 - gmx:100816373 202.986