Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00497 ATGGTGCCCGTTGTTTTGTCTCTCTTATTCTTCTCATTCTTTATTGGGGGTTCTGAGGGTCAGCTTCAAGTGGGTTTCTACTCCAACACATGTCCTCAAGTAGACTCCATTGTCAATGCCATTGTTAGAGACGCTGTTCTCTCTGACCCCAACATGGCTGCTGTCTTGCTCAGACTTCATTTTCATGACTGCTTTGTTGAGGGATGTGATGGTTCGATTCTGATCGACAATGTTCGCAACACTGAATTTATCCATCACATTACTCATTAA 270 0.4333 MVPVVLSLLFFSFFIGGSEGQLQVGFYSNTCPQVDSIVNAIVRDAVLSDPNMAAVLLRLHFHDCFVEGCDGSILIDNVRNTEFIHHITH 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00497 89 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Cca05g00497 89 Pfam Peroxidase 39 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g00497 89 PANTHER PEROXIDASE 7 82 - -
Cca05g00497 89 Gene3D - 22 85 - -
Cca05g00497 89 SUPERFAMILY Heme-dependent peroxidases 21 80 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca05g00497 89 PANTHER PEROXIDASE 25-RELATED 7 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00497 89 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00497 89 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g00497 89 ProSiteProfiles Plant heme peroxidase family profile. 21 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00497 Cca-Chr5 11052576 11053449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00497 6 77 Peroxidase AT4G25980 65.278 4.94e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00497 K00430 - gmx:547549 127.872