Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00495 ATGTACAAGGTATGCTGGAGCAGCGGCTGCTTCGACTCCGACATCCTCGCCGCGTTTGATGTCGCTGTCGCAGACGGCATCGACGTGGCGTCATTGAGCGTCGGCGGCATGGTGGTTCCCTACCACCTTGATGTGATTGCTATTGGCGCCTTCGGCGCGCCCTCTAACGGCGTTTTTGTCTCCGCCTCCGCCAGAAACGGTTGCCCCGGCGGGCTTACGGTGACCAATGTGGTGCCGTGGGTGACCACTGTCGGCGCCGGGACCATGGATAGGGATTTTCTGGCGGATGTGAAGCTTGGAAATGGTAAAATTGTACCTGGGGTTGGCATCTACGATGGACCGGGTTTAACTCCGAGTCGAATGTACCCAATCGTGTATGTTGGTGTAGAACAATTTGGTGGTggtgatggttattcatcttga 423 0.5414 MYKVCWSSGCFDSDILAAFDVAVADGIDVASLSVGGMVVPYHLDVIAIGAFGAPSNGVFVSASARNGCPGGLTVTNVVPWVTTVGAGTMDRDFLADVKLGNGKIVPGVGIYDGPGLTPSRMYPIVYVGVEQFGGGDGYSS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00495 140 Gene3D Peptidase S8/S53 domain 1 89 IPR036852 GO:0004252|GO:0006508
Cca05g00495 140 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 2 112 - -
Cca05g00495 140 Gene3D - 90 126 - -
Cca05g00495 140 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 2 112 - -
Cca05g00495 140 SUPERFAMILY Subtilisin-like 1 128 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00495 Cca-Chr5 11018322 11018744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00495 2 140 Subtilisin-like Serine Gene Family AT3G14240 74.820 8.76e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00495 - - ccaj:109815344 284.263