Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g00494 | ATGGAGAGCGCGTGCCGGAGGAAATGTGATTCGCCGTTTCACCCGTCGACGTCTGCCACGGTTTCGTCTGCGCCGCCGCGGAAGGAGATGAATGCAAGCTATTGTCTTTATCCACAAGTTGCTCATGGTTTAAGATCAAAATTTGTTGAAGGGAAGCAGGGCCCTGTATACCCAAGCTTTCCTCACTCAACCACCCATGGATCAGGCGAAGATGATAGTGGAAATTCATTTCTGGCTCTCCTTTATAGTCCTCCATCCTTGTTACAATATGACTTCCAGGATTTGTCTGATCGCAAACTTTGCATCTCATCTGGTGATTGTACTGCTGCTATTGGGAATTCTGTTGTTCCTTCTATAGAAAGGGGAACCTTCCGAACGTCTGGTCTGGGGTTGATAACAGAAAATTTAATTAACCATAACCTGCAAAGTTGTGTGAACACTTATTCTGGGCTTTCGTCCAGGGGAATGGTTGGTCTGAATAATAGTAGTAATTTTGTCTTCCATGATATTCAGAGTAGCAATACTGCTACTCAGCCCACAGTTCCTGGTGATGAGAAATCAAGGGAGTCTTTTTCTTCTCCAGGTCAATGCCTAGGTACAACCCCTGCATCTAGTCTAAATGTTTGCTGCTCAGATATGCAAACTACACCAAACATGGCTTTAGAACTTTCATCTAAGTCGACTTCCTTTATGAGTGGTTGTCCTCGTGTGTTCTGCATGGGGAAAAGTGGCCATCTTCTTCTTAGCAATACAGGGCTTCTTGGTATTGTTTGCTCATGCCATTGTTGTCACATGTCTGTTCGTAAGTTTTGTGAGCATTCAGGATTACATGGAGTTGACCCAGGGGATGCTGTCTATGTGGAAAGTGGGGAGACCATTTCTCAATGGAAGAAGCTATACTTCTTGAGATTTGGGATTAGGTCTCTGGGAAATGAGAATGAGTGGGACTGGCCAGAAGTATTATCAACAACAGGCAGTCTGATGAAATCCAATGCATCTGCGTTTGATATGTCCAAGACTAATTTGTCTCATATGTTGAGTTCATCTGCAGTCATGTTAAGAAAACAAGCGACAACAATCCAGGATGATTGCAACATTCCACTCAAAGGTTTCACTGGTATTTCACAAAACAGCTTGTATGATCAGTTGAAAAACCAGTTAATGGAATCTAATTTGGCTATGTGTACAACTGCACCAAACTTTGTTGGAACTCAACTGGATAATGATTGTCAGCCTATACCTACTTTCTTTGATTCTCTAAAAAGGAAAGGAATTTGGTCAACTGCCTACTCTTCATTGGAAACTCCAACAAGCCTTTTGAAAGACCATGATTGCATCAAAAAGCAGAGTGCAAAGGATGGTCTTGTAGGCAGAGATGCAGCTTCCTCCAATGCTCATCTTAGGCTTGGTCAACCACCTCAGACGGGAAATCCACTTCCATCATTTATAGAACCACTGCTGTTTAATGCTGTTGCCAGTCCTCCAAAATTGCAACCTTTGAAGCAGATAATTAATAATGCAGACCTCAGCAGGGTGGAGGAATTACAGAATAATTTTAGCTATGTTGCTGATTCGTTCAAAATGGTTGAAGAAATGCCTCAGCTTAAACTCAGGAACTCTATGTCTGCTGTTAGTAATGCTCCAGGTGCTGTTAGAGCTAGATCAGAAACTAATAGTGTGGCCAAGGGTTTATCATTTTCATCATTCTCACAATTTGATAATCAACCCAGGGGAAAGACAAAAGCTAGTGAAAATTTGGGAAGGCAATCGAATAATTGTGGTTTAGGGACCAATAGATATTTACACAATGATAAATGGGCAAGCTTTCCGAAAGACTCTTGTGCCAAAATGAATTCTGGATTTGGAATTGGTCAGTTAATGGACTATCCAAGCTCCATCACAAGAGCTGTAGGTGGCAGTGATAACTGTATTTCAGTTGTTAATACAAAGATAATTGAATCAAGCTTGCCATCATATTTATCTACTGGTGCAAATATTTTGCATCATTCAAACAATGTATCTGCTTTTGGTCGAGAAAAACATGTGACTCCACAGACATCCATTCCATTTGAAGGGATTTTGAAAGGCCTTCCCGAGCATGTTTCAAGTTCTGTGTCAAATCAGACTCCTACTTTGCCACAGCAGCAGGGCATTAATATGGATGCTCATTTGCTTGATGAAAACACGAGGTTGCTTACATTGGCACAGGTACTAGAGTTATCTAAGCAACAACATGCATTGTATTTTAATAATATGAATCAAAAGCAAGGGAGACCAAGCAGTATTTCAAATGTTCAGCATTATATGTATGAGACTTCAACATCTGAACAGGACACTTCTGGCGCAACATTGAAATTGACCCAAAATAGAGGGATTTGTGGGAATCTTGAGAGTAGTGTTGGTTTAGAGAAACTGGCTTCCCTCACAGGTATGAACATGTATTGTGATTTGTCTGGCCTGGCACCAATACCTTTACATTCTAAAGAAAAGGAATCGCAATGTAAACATTCCTATGATCTTCAAAATAAAGAGCCTTCTTTAAGCCTTGGAATAAACAAAGATAATAACAGATCAAGTGCATGTGAAAAATGCTCCGAGCATCCATCCAATGTATGTTTGGGAGGCAAGCACCCTGGTGCAGCTCGGGTAAACTGTTGCAGAAGCAATTTTTTCTCCAGAATTGAACCCGTTTGTTATAACTTAAAGCAACAACTTGCAAATGCCAGTGGTGAAACTTCGTTGAAGATGGCTTCAGATTTAAGTAGAGATCCGTTGAAGGACAAAAATATCCACTTCCACCTTGAGCAAGGTGGGAAGTTAGATGGCCGAGACTCAATCAAAATTGGCTTTCATACACCTCAATGGAGAGATGTGCCGGGTAAGATCAGAAAAGCAGTTTGTGATGCAACATCTTTAGATCAGACAGCTACTGGTTTGGATTGGGAAGGACAAGATGGTGTTCAACTTGAAAATATTTCTATGAAACGCTTCAAAAGAACTATTGATATTGGAGATATGTCAAAAAAGAAAGAAAGTTCTAATGTTTCTTCTGGATGCTCTGTTCCTGTGGTTACTCGGGCATCTGTGGAGGTTAACAAAGTTGATTCCTGTACTGATGATGCTGTAGGCACTGGCTTTTTCAACAACCTTGTAGTTGATGAAGGGTCAGGAATTGTTCAAGACTTGTCGTCAGATTTGGTTGAAAGTGAAAGAAGTGATCAGTTTGTTGTCTCAACTTGTGGGAGTTACTTGAAAAATGAATATCCAAGAGTCTTAAACGATCAACCATGTTGCAATCTCCTTGATGATCTTAAACTGTTAGATTCCTTGATATGGAGGAAAGGACGGAATCAAAATCATTATCTGTTTTCTGCTAAATGTAAAAGTAATCAATCCCAAAATGTCAAGAAGGGCTTCAAAGGAAAAAAGAGGAAGAGAATTGAGGTGAGGATTCCAAATGCTTCATTATCTTCTGGATCCCCTTCCTTATTGCATAAAAGGAACGGTGAAGGTGCTGGGATTTCTAATTCCTCTTCTAGTTTGTCAAAAGAAATGCAAACGCATTCTTTGTGTAGCCCACAAAAATCATCTGACAAGTCTTCTTTTGTTCAACCTTGTAACAAACAAAGGCATTATGCATTTTCATCCAAATTTTTTTCTCGCAAGAATCATCTGAACCAGCATCACAGTTACAAAGTTGGCTCTGAGTCAGAATCAAATTCTAATGCTGAGTTTCACACGTTGCCTGGAGTTTCTGGAACAAAGAAATTAAAAAAGGATCCTACTTCTGATTGTTTTGAGCAGTTTCAAATGCAAGAAACAGTCTATGAGGAACCTGAAAATGTGAGGCTATTCTCTTGCAGGAAGAGAAATGCTCATAGAATCACAAGGCCTGTAGTATGTGGAAAATATGGTGAAATATCTAATGGGCAATTGGCTGGAGGATTGCAAAAACCAGCAAAAATTGTCTCTCTCAGCAAGGTTCTTAAATATTCCAAAAGATGTATGGGCCATGCAAATGGAAAACCTAAACTGACCTCAAAGAAGAAATGGAAGAGATTGAGCATGGGAACTAGTAGTGGGAACCCTGGTTTAGAAATTAAGGAAGGCATTAAAACCCGAAATACAATAATTTGTAATGAAACAAATGTTGATGTGTCTATGGAAGATTTGGAGAGGGGTGGCAAGCCACCTGTTGTTTACGTAGGGAAGAAAGATGACAAGGCTAAGCAGGTTGATAGTGTTGGAAATAGTGCTAATGTTCCATTGAGGGTGAAGAGCAAGGAAGTTCGGAAACAGCGTAGCATTAATGAACTCATTGCTAAAGAAACCAAAGTGATGGATATGATGAATTGTGTTCAAGACAGGGAGCCTGATTTGTGTAGCACAAGTAGAAACTCTATTCAAGGTCACACAAGCATATTCACCATAAATTCAGATGCTTTCTGTTGTGTGTGTCGAAGCTCAAGCAATGATAAATTCAACTGTTTGTTGGAGTGTAGTCAATGTCTACTTAGAGTGCATCAGGCTTGTTATGGTGTTTCCACATTGCCCAAAAAAACTCGTTGGTGTTGCAGGCCATGTCGAACAAACTCAAAAAATATTGCTTGTGTCCTATGTGGTTATGGAGGTGGAGCCATGACTCGAGCAATAATGAGTCACACAATTGTAAAAAGCCTCCTGAAAGTGTGGAATGGTGGGGAAGATGGTATGCCTAAGCATACAACTTCGGATGATGTTTTCAAAAAGGAAATATCTGCATTTCCATCCTCAAAAGCTAGATTAGAAGTTGATCAAGAAAGTGTTTTGAAGCTCAAAATTGTTGATACATCAGCAACTGATCTGGGGAAAGTTCAAATATCAACAAATTGCATACAACACACTCTGACCTCTATTTCTAATTTCAAGGTACATAACAGCATTACAGCAGGAGTTCTTGATCCAACTGTTAAACAATGGATTCATATGGTTTGTGGGCTTTGGACTCCTGGAACAAGATGCCCTAATGTTGACACCATGAGTGCTTTCGATGTATCTGGTGTTTCACGACCAAGAGCAGATGTGGTTTGTTCCATTTGCAATCGACCAGGCGGTTCTTGTATAAAGTGCAGGATTGTTGATTGCTCTGTGAAGTTTCATCCTTGGTGTGCTCACCAGGAGAACCTATTGCAAAGTGAGACTGAAGGCATTGATGACGACAAGATTGGATTTTATGGAAGATGCATGCTTCATACAATTGAACCTAGAAGTCTGTCTATATATGATTATATTGATGAAATGGGCAGTCAAGAAGAAAAGGAATTCACCTGTGCCAGGGCAGAGGGTTACAAGGGCCGTAGATGGGATGGTTTTCACAATAATCACTTGCAAGGTGGATGCCTTGTTCCTGAGGAGCAGCTAAATGCTTGGGTTCACATTAATGGGCAGAAATTATGTTCTCAGGGACTGCCAAAATTCCCAGATTTAGATATTGAGCATGATTGTCGAAAGGAATATGCTCGGTACAAACAAGCAAAGGGATGGAAACACCTTGTTGTATATAAGTCCCGAATTCACGCTCTTGGTCTTTACACTTCACGATTCATTTCCCGGGGTGAAATGGTTGTTGAGTATATTGGTGAAATTGTGGGGCTGCGTGTGTCTGATAAAAGAGAAAAAGAATATCAATCTGGAAAGAAACTTCAGTACAAGAGTGCCTGCTACTTCTTCAGGATAGACAAAGAGCATATTATTGATGCCACGAGGAAAGGGGGGATTGCTCGATTTGTTAACCACTCCTGCCTGCCAAATTGCGTGGCAAAAGTGATTACTATAAGGCATGAGAAGAAGGTTGTCTTCTTTGCAGAGAGGGACATATTTCCTGGTGAAGAGATTACGTATGATTACCACTTTAACCACGAAGACGAAGGAAAAATTCCTTGTTACTGCAATTCGAAAAATTGCAGGCGCTATATGAATTGA | 5961 | 0.4036 | MESACRRKCDSPFHPSTSATVSSAPPRKEMNASYCLYPQVAHGLRSKFVEGKQGPVYPSFPHSTTHGSGEDDSGNSFLALLYSPPSLLQYDFQDLSDRKLCISSGDCTAAIGNSVVPSIERGTFRTSGLGLITENLINHNLQSCVNTYSGLSSRGMVGLNNSSNFVFHDIQSSNTATQPTVPGDEKSRESFSSPGQCLGTTPASSLNVCCSDMQTTPNMALELSSKSTSFMSGCPRVFCMGKSGHLLLSNTGLLGIVCSCHCCHMSVRKFCEHSGLHGVDPGDAVYVESGETISQWKKLYFLRFGIRSLGNENEWDWPEVLSTTGSLMKSNASAFDMSKTNLSHMLSSSAVMLRKQATTIQDDCNIPLKGFTGISQNSLYDQLKNQLMESNLAMCTTAPNFVGTQLDNDCQPIPTFFDSLKRKGIWSTAYSSLETPTSLLKDHDCIKKQSAKDGLVGRDAASSNAHLRLGQPPQTGNPLPSFIEPLLFNAVASPPKLQPLKQIINNADLSRVEELQNNFSYVADSFKMVEEMPQLKLRNSMSAVSNAPGAVRARSETNSVAKGLSFSSFSQFDNQPRGKTKASENLGRQSNNCGLGTNRYLHNDKWASFPKDSCAKMNSGFGIGQLMDYPSSITRAVGGSDNCISVVNTKIIESSLPSYLSTGANILHHSNNVSAFGREKHVTPQTSIPFEGILKGLPEHVSSSVSNQTPTLPQQQGINMDAHLLDENTRLLTLAQVLELSKQQHALYFNNMNQKQGRPSSISNVQHYMYETSTSEQDTSGATLKLTQNRGICGNLESSVGLEKLASLTGMNMYCDLSGLAPIPLHSKEKESQCKHSYDLQNKEPSLSLGINKDNNRSSACEKCSEHPSNVCLGGKHPGAARVNCCRSNFFSRIEPVCYNLKQQLANASGETSLKMASDLSRDPLKDKNIHFHLEQGGKLDGRDSIKIGFHTPQWRDVPGKIRKAVCDATSLDQTATGLDWEGQDGVQLENISMKRFKRTIDIGDMSKKKESSNVSSGCSVPVVTRASVEVNKVDSCTDDAVGTGFFNNLVVDEGSGIVQDLSSDLVESERSDQFVVSTCGSYLKNEYPRVLNDQPCCNLLDDLKLLDSLIWRKGRNQNHYLFSAKCKSNQSQNVKKGFKGKKRKRIEVRIPNASLSSGSPSLLHKRNGEGAGISNSSSSLSKEMQTHSLCSPQKSSDKSSFVQPCNKQRHYAFSSKFFSRKNHLNQHHSYKVGSESESNSNAEFHTLPGVSGTKKLKKDPTSDCFEQFQMQETVYEEPENVRLFSCRKRNAHRITRPVVCGKYGEISNGQLAGGLQKPAKIVSLSKVLKYSKRCMGHANGKPKLTSKKKWKRLSMGTSSGNPGLEIKEGIKTRNTIICNETNVDVSMEDLERGGKPPVVYVGKKDDKAKQVDSVGNSANVPLRVKSKEVRKQRSINELIAKETKVMDMMNCVQDREPDLCSTSRNSIQGHTSIFTINSDAFCCVCRSSSNDKFNCLLECSQCLLRVHQACYGVSTLPKKTRWCCRPCRTNSKNIACVLCGYGGGAMTRAIMSHTIVKSLLKVWNGGEDGMPKHTTSDDVFKKEISAFPSSKARLEVDQESVLKLKIVDTSATDLGKVQISTNCIQHTLTSISNFKVHNSITAGVLDPTVKQWIHMVCGLWTPGTRCPNVDTMSAFDVSGVSRPRADVVCSICNRPGGSCIKCRIVDCSVKFHPWCAHQENLLQSETEGIDDDKIGFYGRCMLHTIEPRSLSIYDYIDEMGSQEEKEFTCARAEGYKGRRWDGFHNNHLQGGCLVPEEQLNAWVHINGQKLCSQGLPKFPDLDIEHDCRKEYARYKQAKGWKHLVVYKSRIHALGLYTSRFISRGEMVVEYIGEIVGLRVSDKREKEYQSGKKLQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVITIRHEKKVVFFAERDIFPGEEITYDYHFNHEDEGKIPCYCNSKNCRRYMN | 1986 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g00494 | 1986 | SUPERFAMILY | FYVE/PHD zinc finger | 1477 | 1534 | IPR011011 | - | |
Cca05g00494 | 1986 | Pfam | Tify domain binding domain | 253 | 299 | IPR032308 | - | |
Cca05g00494 | 1986 | MobiDBLite | consensus disorder prediction | 1339 | 1367 | - | - | |
Cca05g00494 | 1986 | CDD | ePHD | 1652 | 1744 | - | - | |
Cca05g00494 | 1986 | Pfam | SET domain | 1855 | 1962 | IPR001214 | GO:0005515 | |
Cca05g00494 | 1986 | CDD | SET_SETD1-like | 1844 | 1982 | - | - | |
Cca05g00494 | 1986 | ProSiteProfiles | Zinc finger PHD-type profile. | 1480 | 1531 | IPR019787 | - | |
Cca05g00494 | 1986 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX | 27 | 1986 | - | - | |
Cca05g00494 | 1986 | SMART | PHD_3 | 1689 | 1745 | IPR001965 | - | |
Cca05g00494 | 1986 | SMART | PHD_3 | 1482 | 1529 | IPR001965 | - | |
Cca05g00494 | 1986 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1471 | 1536 | IPR013083 | - | |
Cca05g00494 | 1986 | Pfam | PHD-zinc-finger like domain | 1650 | 1724 | - | - | |
Cca05g00494 | 1986 | Pfam | PHD-finger | 1495 | 1529 | - | - | |
Cca05g00494 | 1986 | MobiDBLite | consensus disorder prediction | 1171 | 1202 | - | - | |
Cca05g00494 | 1986 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 1631 | 1745 | IPR034732 | - | |
Cca05g00494 | 1986 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1631 | 1745 | IPR013083 | - | |
Cca05g00494 | 1986 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cca05g00494 | 1986 | Gene3D | SET domain | 1754 | 1986 | IPR046341 | - | |
Cca05g00494 | 1986 | MobiDBLite | consensus disorder prediction | 1230 | 1261 | - | - | |
Cca05g00494 | 1986 | MobiDBLite | consensus disorder prediction | 571 | 594 | - | - | |
Cca05g00494 | 1986 | SMART | PostSET_3 | 1970 | 1986 | IPR003616 | - | |
Cca05g00494 | 1986 | SMART | set_7 | 1842 | 1969 | IPR001214 | GO:0005515 | |
Cca05g00494 | 1986 | ProSiteProfiles | SET domain profile. | 1842 | 1963 | IPR001214 | GO:0005515 | |
Cca05g00494 | 1986 | SUPERFAMILY | SET domain | 1808 | 1982 | IPR046341 | - | |
Cca05g00494 | 1986 | PANTHER | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER | 27 | 1986 | - | - | |
Cca05g00494 | 1986 | ProSiteProfiles | Post-SET domain profile. | 1970 | 1986 | IPR003616 | - | |
Cca05g00494 | 1986 | MobiDBLite | consensus disorder prediction | 174 | 193 | - | - | |
Cca05g00494 | 1986 | MobiDBLite | consensus disorder prediction | 1230 | 1248 | - | - | |
Cca05g00494 | 1986 | MobiDBLite | consensus disorder prediction | 1150 | 1202 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g00494 | Cca-Chr5 | 10996970 | 11015478 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca05g00494 | 1844 | 1982 | C2H2 Transcription Factor Family | AT2G23740 | 33.333 | 1.31e-16 | 84.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Cca05g00494 | SET | 1e-16 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca05g00494 | - | - | ccaj:109815338 | 3993.74 |