Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca05g00446 | ATGGTTTGTGAGATGGAGAGTGAGTGTATTGAGGACATGGACATCGAAGTCCTCTCTTCAATGTGGCCTGAAGATATTGGCACTGATGTTGGAAAACAGTTCAATATAGAGAAGCCTGGAATGGACCAAGACATGTTGGAGGAAGTCACAATCTTAGAGGAGCCAACTATAGCTGATTTCCAGCGTCTCATGGAGCTTACCAATTACACAGATAAAGGTTCTTCTCAGTTGGCATATCTCATGAAACACTGGGAGTATAAGCAGGCTAATGCAGTTCGGCTTCTCAGAGAGGAACTTGACAACCTTAGCAAGCAAAGGCAGGAAGTTGAGCTCAGGAAGTTGGAGATACTCAAAGATAATCGATTTGAGGAAGAGAATTACGGTGGTGACAAACGTCCAGTTTCCATTTTGGATGAAGTTTACTATACATGGCAAGATTTGCCAGTGCCACTCAGGAAGAGTGATGTGATTGTGCAAAATAAGAGGATTGAAATTGATGCTGAGTTTGACACTGTTGTGTATTGGAAACAGCGGGCGATGCAGTTGGAAAGACAATTGGAGGCAAGTGTCCAGAGAGAGCAGATACTAATGGACAAGTTACAAGAAAGTATAAAGAATCTAGAAAGGCAGTCCTCACCTGTGGAAGAACTATCCCAGATTCTGAAGAGAGCAGATAATTTCTTACATTTTATACTCCAAAATGCACCTGTTGTTATTGGCCATCAGGACAAAGAGTTGCGCTATCGCTTTATCTACAATCATTTTCCAAGTTTACAAGAGGAGGACATCATAGGAAAAACAGATGTTGAAATTTTCACAGGATCTGGTGTTAAGGAATCTCAAGATTTCAAGAGGGAAGTAATGGAGAAAGGGTTGCCTGCAAAAAAGGAAATTACTTTTGAGACAGAATTATTTGGATCAAAGACATTCTTGATATATGTAGAACCTGTCTTTAGCAAAGCAGGAGAAACAATTGGAATAAACTATATGGGAATGGAAATAACAGATCAGGTAAGAAAAAGAGAAAGAATGGCAAAGCTTAGGGAAGAGATTGCTGTCCAGAAAGCCAAGGAAACAGAACTTAATAAGACCATTCACATTACAGAGGAGACTATGAGAGCAAAACAAATGCTGGCAACAATGTCTCATGAGATAAGATCTCCACTGTCTGGGGTTGTTAGCATGGCTGAAATTCTTTCCACCACAAAACTAGATCGGGAGCAAAGGCAACTCTTGGGTGTTATGATATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTTATGAAATTGGAAGCAACCAAATTCCGGCCAAGAGAGGTAGTAAAGCATGTGCTCCAGACAGCTGCAGCATCATTGCAGAAAATGTTAACCTTGGAAGGAAATGTGGCAGATGATATACCTGTTGAGGTCATTGGAGATGTTTTGAGGATTCGGCAGATTCTCACAAATTTAGTCAGCAATGCGGTAAAGTTTACACATCACGGCAAAGTTGGTATAAATCTTTACGTTGTTCCAGAACCACCTTTTGCCAAAGAAGAAGGCCATCAAAAGATGAGCACAGAGCAGTCAACAAATTCAGCAAATGGGGTGAAGGAAGAGAAACGTGCGTCAACACCACGAAGCAGCAGTGATCAAAATTGTCTTGATGGTCGGAAACACAAAGACCATCCTAGCCAAAACCATGCATTCAACGATGAATGTAGATCTTCAGTTAAAAGTGAATGCTCAATGAATGGAGATACTGAGGAGCAAACTCATTCCACTGAAACAACAGTGTGGATACGCTGTGACGTATACGACACAGGAATTGGAATACCAGAAAAGGCTATACCTACTTTATTTAGAAGGTACATGCAAGTTAGTGCCGACCATGCTCGAAAGTATGGGGGCACAGGACTGGGACTAGCAATTTGCAAACAACTGGTTGAGTTGATGGGGGGTCATCTAACAGTGGCTAGCAAAGAACATTGTGGTTCTACCTTCACATTCATACTTCCATACAAGGTTTCAACAGCTTGTGACAACTCTGATGACCCAGATGAGCTCTCAGATGTGGATGATACTGATGATGATACCACAGAGGGGTTCTTCCAATTCCAACCACGCACTTTGGGTTCTCTCTTCTCTTCTAATGGACCTACAAGGCCCCAAAATATACTACCAGGTTTTAGGAGCTCAAATAAGTTCAATGGCTTTTCAGAGAATTCTTACTCATTCCCCACTACCAACATAAAATCAAAGGGGACTAGTTCAACCGAGGATGCATCTTCAGTTATTGTTGATGCTTCAGAGATGTCTGAATCAACAAGTTCATCGAGTCACATCCCAGAAACAAAGCATGAAAGTTTGGTTAACACAAACAAACAGAATGAAGATAAGGCACATGCTCGGTTACAGAATGGTAGCTTAGACTCTTCTCAACATAAGGAGGGAATGACTCTAGGAACAATGTCAAGTGAACCCCAACAAACATGTCACCAAGTGAAGACAGACTTAACCTCCCAATGGGTTAGCAGTACTAATAATAATGACACATCATCAGAAGTGACCAAATCTGCATTAAAGCCTAAGATTCTTCTTGTTGAAGATAACAAGATCAATGTCATGGTTACACAGTCAATGATGAAGAGGTTAGGCTATAGCATGGATGTTGTGCATAATGGAGTGGAAGCAGTACGTGCAGTTCAGCGCCATTCTTATGATGTCATTTTGATGGATGTTTACATGCCAGTTATGAATGGTCTTCAAACAACAAAACTGATTCGGTCTTATGAGGAAACGGGCAATTGGGAAGCTGCAAGTAAAGCTGGAATTGAACCATGTTTACCAACTTCACATGAATGTTCTGTACTACCTAAAAACCGGATCCACATCATTGCGATGACAGCAAACACATTGTCAGAGAGTGCTGAGGAATGTTATGCAACTGGTATGGACTCGTTTGTGTCAAAACCTGTGACATTCCAAAAATTGAAAGATTGTCTAGAACAGTACCTGAGGTGA | 3039 | 0.411 | MVCEMESECIEDMDIEVLSSMWPEDIGTDVGKQFNIEKPGMDQDMLEEVTILEEPTIADFQRLMELTNYTDKGSSQLAYLMKHWEYKQANAVRLLREELDNLSKQRQEVELRKLEILKDNRFEEENYGGDKRPVSILDEVYYTWQDLPVPLRKSDVIVQNKRIEIDAEFDTVVYWKQRAMQLERQLEASVQREQILMDKLQESIKNLERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVKESQDFKREVMEKGLPAKKEITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMEITDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQRQLLGVMISSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKMLTLEGNVADDIPVEVIGDVLRIRQILTNLVSNAVKFTHHGKVGINLYVVPEPPFAKEEGHQKMSTEQSTNSANGVKEEKRASTPRSSSDQNCLDGRKHKDHPSQNHAFNDECRSSVKSECSMNGDTEEQTHSTETTVWIRCDVYDTGIGIPEKAIPTLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGHLTVASKEHCGSTFTFILPYKVSTACDNSDDPDELSDVDDTDDDTTEGFFQFQPRTLGSLFSSNGPTRPQNILPGFRSSNKFNGFSENSYSFPTTNIKSKGTSSTEDASSVIVDASEMSESTSSSSHIPETKHESLVNTNKQNEDKAHARLQNGSLDSSQHKEGMTLGTMSSEPQQTCHQVKTDLTSQWVSSTNNNDTSSEVTKSALKPKILLVEDNKINVMVTQSMMKRLGYSMDVVHNGVEAVRAVQRHSYDVILMDVYMPVMNGLQTTKLIRSYEETGNWEAASKAGIEPCLPTSHECSVLPKNRIHIIAMTANTLSESAEECYATGMDSFVSKPVTFQKLKDCLEQYLR | 1012 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca05g00446 | 1012 | MobiDBLite | consensus disorder prediction | 809 | 833 | - | - | |
| Cca05g00446 | 1012 | SUPERFAMILY | CheY-like | 868 | 1012 | IPR011006 | - | |
| Cca05g00446 | 1012 | Coils | Coil | 92 | 119 | - | - | |
| Cca05g00446 | 1012 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 427 | 680 | IPR036890 | - | |
| Cca05g00446 | 1012 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 484 | 679 | IPR003594 | - | |
| Cca05g00446 | 1012 | Gene3D | - | 862 | 1012 | - | - | |
| Cca05g00446 | 1012 | MobiDBLite | consensus disorder prediction | 524 | 579 | - | - | |
| Cca05g00446 | 1012 | SMART | REC_2 | 868 | 1007 | IPR001789 | GO:0000160 | |
| Cca05g00446 | 1012 | MobiDBLite | consensus disorder prediction | 718 | 737 | - | - | |
| Cca05g00446 | 1012 | CDD | HisKA | 372 | 434 | IPR003661 | GO:0000155|GO:0007165 |
Showing 1 to 10 of 33 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca05g00446 | - | - | gmx:100796072 | 1815.05 |
Showing 1 to 1 of 1 entries