Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00445 ATGAGAAGCATTCCTATTCCCCCCCCTTCAAATCTAAGCACATTAGCCCCAACAAGTTCAGTTAGGTCCCCATGGCACTCTCCTGTGCCCTACCTCTTCGGAGGACTCGCCACCGTTATGGCTCTCATAGCCTTGGCACTCTTCATGCTCGCTTGCTCCTATTGGAGACTCACCCATCAAACGGATTTGGAAAACAACAGCAACATCAAAGAGGGTGATGAGGACCCTCAAAACAAGGAACAACCTAAGGTGTACCAGGAGAAGATCCTAGTCATCATGGCAGGGGATCACAAACCAACGTTCTTGGCCACCCCTTCATCATCCTCATCCTCTTTAGTTGCTAACCATTTCGACAAACACATCGGAGATTCCGAGGGTTGTCACAAGTCCCACAAGGAAAATGGAAGTTCCCAACATGAACAACATAGTCAAAATTTATGA 441 0.4762 MRSIPIPPPSNLSTLAPTSSVRSPWHSPVPYLFGGLATVMALIALALFMLACSYWRLTHQTDLENNSNIKEGDEDPQNKEQPKVYQEKILVIMAGDHKPTFLATPSSSSSSLVANHFDKHIGDSEGCHKSHKENGSSQHEQHSQNL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00445 146 MobiDBLite consensus disorder prediction 64 85 - -
Cca05g00445 146 MobiDBLite consensus disorder prediction 66 82 - -
Cca05g00445 146 MobiDBLite consensus disorder prediction 123 146 - -
Cca05g00445 146 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 1 144 IPR040359 GO:0080143
Cca05g00445 146 PANTHER DUMPER, PUTATIVE-RELATED 1 144 - -
Cca05g00445 146 MobiDBLite consensus disorder prediction 1 23 - -
Cca05g00445 146 MobiDBLite consensus disorder prediction 123 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00445 Cca-Chr5 9694960 9695867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00445 23 111 Glutamine Dumper (GDU) Family AT5G57685 54.255 2.77e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00445 - - gmx:100306141 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00445 05 9694960 9695867 Cca05g00445 05 9694960 9695867 ECH