Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00430 ATGGATCCCTACAAGAATCGCCCATCGAGCGCTTTCAATTCTCCCTTCTGGACTACCAATTCTGGTGCTCCCATCTGGAACAATAACTCATCGCTCACGGTTGGATCTAGAGGTCCTATTCTTCTGGAGGATTATCATCTGGTGGAGAAGCTTGCAAATTTTGACAGGGAACGGATCCCTGAACGTGTTGTCCATGCCAGGGGAGCTAGCGCAAAGGGTTTCTTCGAAGTGACGCATGACATCTCTCACCTCACATGTGCTGATTTCCTTCGAGCTCCTGGAGTTCAGACCCCCGTCATCGTCCGTTTCTCCACTGTTATCCACGAGCGTGGCAGCCCTGAAACCTTGAGGGATCCTCGAGGATTTGCTGTCAAATTTTACACAAGAGAGGGTAACTTCGACCTTGTGGGAAACAACTTCCCTGTCTTCTTTGTTCGTGATGGCCTCAAGTTTCCTGATATGGTTCATGCTCTCAAACCCAATCCCAAGTCCCACATCCAGGAGGATTGGAGGATCCTTGATTTCTTCTCCCACCATCCTGAAAGCCTTCACATGTTCTCCTTCTTATTTGATGACCTGGGTGTCCCTCAAGATTACAGGCATATGGATGGTTTTGGTGTTAACACATATACCCTTATCAACAAGGCTGGGAAGGCACTCTATGTCAAATTTCATTGGAAACCCACTTGTGGTGTAAAGTGTCTATTGGAAGAGGAGGCCATTAGGGTTGGAGGGTCCAACCACAGTCATGCCACCAAAGACCTTTACGATTCAATTGCTGCTGGAAACTATCCCGAGTGGAAACTTTACATCCAAACATTGGATCCTGAACACGAAGACAAATTTGACTTTGACCCACTTGATGTAACTAAGACCTGGCCTGAGGATGTTTTGCCCCTGCAGCCAGTTGGCCGCATGGTCTTGAATAAGAACATAGATAACTTCTTTGCTGAGAATGAACAACTTGCATTTTGCCCTGCCATTATCGTACCTGGTGTGTACTATTCAGAAGATAAATTGCTTCAGACTCGAATATTCTCCTATGCTGATAGTCAAAGACACAGACTTGGACCAAATTATCTGCAGATTCCTGCTAATGCCCCCAAGTGTGCACATCACAACAATCACCATGAAGGTTTCATGAATTTCATGCACAGGGATGAAGAGGTCAATTACTTCCCTTCCAGGTATGATCCTGTTCGTCATGCGGAAAAGGTTCCCATTCCTCCTCGTATCCTAGGTGGGAAGCGTGAAAAGGTTAGTTTTTGTCAATTTCTTGGTGATCAAGACATAAAATATTTGTTTGATCAGTTCACTTTCTGA 1323 0.4558 MDPYKNRPSSAFNSPFWTTNSGAPIWNNNSSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGLKFPDMVHALKPNPKSHIQEDWRILDFFSHHPESLHMFSFLFDDLGVPQDYRHMDGFGVNTYTLINKAGKALYVKFHWKPTCGVKCLLEEEAIRVGGSNHSHATKDLYDSIAAGNYPEWKLYIQTLDPEHEDKFDFDPLDVTKTWPEDVLPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSEDKLLQTRIFSYADSQRHRLGPNYLQIPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKVPIPPRILGGKREKVSFCQFLGDQDIKYLFDQFTF 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00430 440 ProSiteProfiles catalase family profile. 14 440 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca05g00430 440 Gene3D Catalase core domain 8 422 - -
Cca05g00430 440 PRINTS Catalase signature 299 326 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca05g00430 440 PRINTS Catalase signature 94 112 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca05g00430 440 PRINTS Catalase signature 331 357 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca05g00430 440 PRINTS Catalase signature 31 54 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca05g00430 440 PRINTS Catalase signature 115 132 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca05g00430 440 PRINTS Catalase signature 134 152 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca05g00430 440 PANTHER CATALASE 2 420 - -
Cca05g00430 440 Pfam Catalase 18 398 IPR011614 GO:0004096|GO:0020037
Cca05g00430 440 PIRSF Catalase_clade1-3 6 421 IPR024711 GO:0004096|GO:0006979|GO:0020037
Cca05g00430 440 SUPERFAMILY Heme-dependent catalase-like 13 416 IPR020835 GO:0020037
Cca05g00430 440 ProSitePatterns Catalase proximal active site signature. 54 70 IPR024708 GO:0004096
Cca05g00430 440 ProSitePatterns Catalase proximal heme-ligand signature. 344 352 IPR002226 GO:0020037
Cca05g00430 440 PANTHER CATALASE 2 420 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca05g00430 440 SMART Catalase_2 18 401 IPR011614 GO:0004096|GO:0020037
Cca05g00430 440 CDD catalase_clade_1 16 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00430 Cca-Chr5 9443100 9447317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00430 K03781 - gmx:100037447 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00430 05 9443100 9447317 Cca05g00430 05 9443100 9447317 ECH