Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00419 ATGGCAGCGGCAGCGGCAGCAGTGAAGGTGTACGGACCACCCATGTCCACCGCCGTATCAAGGGTCTTGGCCTGTCTCCTCGAGAAAGACGTCCAATTCCAGCTCATCCCCGTCAACATGGCCAAAGGCGAACACAAGAAGCCTCCCTTCCTCAAGATCCAGCCCTTCGGTCAAGTTCCCGCATTTCAAGACGACCACATTACTCTCTTCGAGTCTCGTGCGATATGCCGCTACGTGTGTGAGAAACACGGGGAGAAAGGGAACAGGGAGCTGTACGGAACGAACCCGTTGGCGAGGGCGTCGATAGATCAATGGTTGGAGGCAGAAGCACAGAGCTTCAACCCACCTTCGTCGACTCTGGTGTTCCAGCTGGCATTCGCTCCGCGAATGAAGATAAAGCAGGACGAGGGTGCCATAAGGCAGAGCACAGAAAAGCTTGCGAAAGTGCTTGAGGTGTACGATAAGAGGCTTGGGGAGAGTCGTTTCTTAGCGGGGGACGACTTCTCTCTTGCCGATCTCTCCCATCTTCCCAACGCTCACTATTTGGTCCATTCCCCCCACGCTGCTCCTCTCTTCAATTCTTCTCCAAATGTGTCCAGATGGTGGAACGAGATCTCCTCACGCAACTCGTGGAACAAAGTCCTTCAATTGCACCGAGGTGCTTCACTTTCCCCCTAA 678 0.5442 MAAAAAAVKVYGPPMSTAVSRVLACLLEKDVQFQLIPVNMAKGEHKKPPFLKIQPFGQVPAFQDDHITLFESRAICRYVCEKHGEKGNRELYGTNPLARASIDQWLEAEAQSFNPPSSTLVFQLAFAPRMKIKQDEGAIRQSTEKLAKVLEVYDKRLGESRFLAGDDFSLADLSHLPNAHYLVHSPHAAPLFNSSPNVSRWWNEISSRNSWNKVLQLHRGASLSP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00419 225 SUPERFAMILY Thioredoxin-like 7 87 IPR036249 -
Cca05g00419 225 SFLD Main.5: Phi-like 6 217 - -
Cca05g00419 225 Pfam Glutathione S-transferase, C-terminal domain 119 208 IPR004046 -
Cca05g00419 225 Gene3D - 94 215 - -
Cca05g00419 225 CDD GST_C_Phi 97 215 IPR034347 -
Cca05g00419 225 PANTHER GLUTATHIONE S-TRANSFERASE RHO 7 217 - -
Cca05g00419 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 95 225 IPR010987 -
Cca05g00419 225 CDD GST_N_Phi 8 82 - -
Cca05g00419 225 SFLD Glutathione Transferase (cytosolic) 6 217 IPR040079 -
Cca05g00419 225 SUPERFAMILY GST C-terminal domain-like 78 217 IPR036282 -
Cca05g00419 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Cca05g00419 225 Gene3D Glutaredoxin 7 91 - -
Cca05g00419 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 87 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00419 Cca-Chr5 9083799 9084834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00419 10 219 Glutathione S-transferase Gene Family AT2G47730 47.143 4.19e-66 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00419 K00799 - zju:107422694 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00419 05 9083799 9084834 Cca05g00419 05 9083799 9084834 ECH