Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00417 ATGGAGAAAGAGAAACATCATTCTAATCTGAAGAGCAGGATCTTGAAGATACTGCCAAAAGCGGCGGCGGTGACATTCCAGAACCCTCCCTTCAGCCCAGGAAGGGATCACAAATTCAAATCCAACGGCGGCAAGGGCTTCTTCTCAGGCCCGATGATCCCCGATGAAGCTAGAAGAAAGCCCAGGCACGGAGGCGTTGAAACCCAGGAGCCCACATCGCCCAAAATCTCCTGCATGGGCCAGATCAAGCACAAGAAGAAGCGCGTCACGAAAGGAAGCGCCAACACCGTGTTGATTCCCCCACGCGCCCGAGACTCCACTCCCACAGAGGAAAAGAAGCAGCCTTCGAAGCTTCAGAGGATGTTTTTCCACACGGGGAAGCCCAAACCTGCGGGAAGGAAAAAATCTGTTGCGGTCACGGACACGGCGCCGCCGCTGGGCCACATGCGGCGATTCGCGAGTGGGCGCGAGACTTTTTCCAATTTTGATTGGAAGGCTCAGATTGCGCCGGAGGAAAGGGACTGCTATTCGGACTACGATGATAGAGTGGAGAGCGATGCAGAGGATGAAATCTTGATCCCTTTCTCTGCTCCTATTAtggttggtggtggtggtggtggtggttgtgCAGCGAGTGTGCCTAATGTGCAACCCCGGAAAGAGATTAATTTATGGAAAAGAAGAACCATGGCACCACCTAGGCCTCTTCAGTTGAACCCCGTGCTCACTGCCAAATGA 738 0.5122 MEKEKHHSNLKSRILKILPKAAAVTFQNPPFSPGRDHKFKSNGGKGFFSGPMIPDEARRKPRHGGVETQEPTSPKISCMGQIKHKKKRVTKGSANTVLIPPRARDSTPTEEKKQPSKLQRMFFHTGKPKPAGRKKSVAVTDTAPPLGHMRRFASGRETFSNFDWKAQIAPEERDCYSDYDDRVESDAEDEILIPFSAPIMVGGGGGGGCAASVPNVQPRKEINLWKRRTMAPPRPLQLNPVLTAK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00417 245 PANTHER OS09G0542900 PROTEIN 1 239 - -
Cca05g00417 245 MobiDBLite consensus disorder prediction 28 117 - -
Cca05g00417 245 PANTHER OS09G0542900 PROTEIN 1 239 IPR038796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00417 Cca-Chr5 9030640 9032254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00417 - - gmx:100815089 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00417 05 9030640 9032254 Cca05g00417 05 9030640 9032254 ECH
Cca05g00417 05 9030640 9032254 Cca07g00234 07 2994212 2995294 PCT