Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00396 ATGGACGCAGCAGCTCCTCTACTATGCGCAGGAATAACAGTGTTCAGTCCCTTGAAGGACCACGGTTTGGTAGAAACTCCGGGGAAAAAGATTGGTGTGGTTGGTTTGGGTGGGCTTGGACACATAGCTGTTAAATTTGGCAAGGCTTTTGGCCACCATGTTACTGTCATAAGCACTTCTCCCTCCAAAGAAGCTGAAGCTAAGGACCGTTTGGGTGCTGATGATTTCATAGTCAGCTCCAACCCCAAACAATTACAGGCTGCAAAAAGAAGCCTAGATTTCATATTGGACACTGTATCAGCAGAGCACGCTCTCTTGCCCATCATGGAAATGCTAAAAGTAAATGGGACCTTATTCATTGTGGGTGCACCGGACAAGCCATTCCAATTACCAGCTTTCCCATTGATATTTGGGAAGAGATCAGTGAAGGGTGGGATCATAGGGGGAATGAAAGAGACGCAGGAAATGATGGAGGTTTGCGGGAAATACAATATAACGAGTGACATTGAGTTGATCACACCTGACAGAATCAACGAGGCTTTGGAGCGTCTTGCTAAAAACGATGTACGCTACCGTTTTGTCATTGACATTGCAGCCACTTCCAACAACTAG 612 0.4608 MDAAAPLLCAGITVFSPLKDHGLVETPGKKIGVVGLGGLGHIAVKFGKAFGHHVTVISTSPSKEAEAKDRLGADDFIVSSNPKQLQAAKRSLDFILDTVSAEHALLPIMEMLKVNGTLFIVGAPDKPFQLPAFPLIFGKRSVKGGIIGGMKETQEMMEVCGKYNITSDIELITPDRINEALERLAKNDVRYRFVIDIAATSNN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00396 203 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 200 - -
Cca05g00396 203 Pfam Zinc-binding dehydrogenase 38 159 IPR013149 -
Cca05g00396 203 Gene3D - 1 196 - -
Cca05g00396 203 PANTHER ALDEHYDE REDUCTASE 1 200 - -
Cca05g00396 203 Gene3D - 10 167 - -
Cca05g00396 203 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 165 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00396 Cca-Chr5 8703293 8705765 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00396 2 200 Monolignol Biosynthesis Gene Families AT2G21730 61.307 2.57e-77 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00396 K00083 - ccaj:109791589 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00396 05 8703293 8705765 Cca05g00396 05 8703293 8705765 ECH