Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00395 ATGGATAAGTTATTTTGTGAGAGAGTAGTAACACTAACAGTTGTGTTGGTTTTGTTTGTTATGATACGATTTCCGGAAGCAGTAGCTCAAAACGAAACAATTCCGGCATTGTTTGCATTTGGTGACTCAATCCTTGATACCGGAAATAATAACAACCTTCAAACGTTAGTTAAGTCCAATGCTCCTCCCTATGGAAGGAATTTTCCGGGAGGTAAACCTACCGGAAGATTCTGTGATGGAAAAATACCCACAGATTTGATAGCAACGGCTCTGGGAATCAAAGAAACGGTACCAGCATATCTTAGTGCTAACTTGAGGTCTCAAGAACTCTCCACCGGAGTATGCTTCGCTTCAGCTGGTTCAGGAATTGATGATCTCACTGCTCAGATACAGGGAGTTATATCACAACCAGCCCAACTAAAAATGTTTCAAGAATACATAGGAAAGCTAAAAGCAGTTGTTGGACAACAACGTGCGACAGATATCATATCCAAAAGCTTGTACCTCGTTTCCGCAGGCAACAATGACATTGCCATTACCTATTCTCAGATATTAGCCCCAACACAACCTTTTCCATTATATGCCTCTCGTTTAATTTCCACCACTTCAAATTTCCTCGAGAGTCTATACGAACTTGGAGCACGAAGAGTTTGGGTACTGAGCACATTGCCACTCGGATGCTTGCCTGGAGCTAGAACAGCCGCGGGAGGACTATTAAGGGATTGTGCAATCCTTGAGAACCAATTAGCACAGTCATTCAATGGTCAATTATCAACAGCAGTTAATTCTATCGGTGCCACCCTTTCCAATTATGACATTAGGTTTATCGATGTCTATACTCCTCTCTTTAATCTCATACAGAATCCTCAGTCAGGAGAGTTTGATGACGTGGCGGACGCGTGTTGCGGAACTGGCGCATCCAAAATATCAGGGATATGTAACCTTCTCAATGTGTGTCCAAATCCTTCCAAATACGTTTTCTGGGATTTTGCACATCCAACTGAGAGAGCTTATCAGCTTATTGTCTCGTCTGTACTACGGTCACACGCCAACAATGTTTCCTCTCTCTCACACTAA 1077 0.4262 MDKLFCERVVTLTVVLVLFVMIRFPEAVAQNETIPALFAFGDSILDTGNNNNLQTLVKSNAPPYGRNFPGGKPTGRFCDGKIPTDLIATALGIKETVPAYLSANLRSQELSTGVCFASAGSGIDDLTAQIQGVISQPAQLKMFQEYIGKLKAVVGQQRATDIISKSLYLVSAGNNDIAITYSQILAPTQPFPLYASRLISTTSNFLESLYELGARRVWVLSTLPLGCLPGARTAAGGLLRDCAILENQLAQSFNGQLSTAVNSIGATLSNYDIRFIDVYTPLFNLIQNPQSGEFDDVADACCGTGASKISGICNLLNVCPNPSKYVFWDFAHPTERAYQLIVSSVLRSHANNVSSLSH 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00395 358 Pfam GDSL-like Lipase/Acylhydrolase 37 342 IPR001087 GO:0016788
Cca05g00395 358 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 37 48 IPR008265 GO:0006629|GO:0016298
Cca05g00395 358 SUPERFAMILY SGNH hydrolase 163 345 - -
Cca05g00395 358 CDD SGNH_plant_lipase_like 35 346 IPR035669 -
Cca05g00395 358 PANTHER GDSL ESTERASE/LIPASE EXL3 8 353 - -
Cca05g00395 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 353 - -
Cca05g00395 358 Gene3D SGNH hydrolase 23 352 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00395 Cca-Chr5 8695260 8696848 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00395 12 354 Pollen Coat Proteome AT1G75910 39.489 4.99e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00395 - - gmx:100786032 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00395 05 8695260 8696848 Cca05g00395 05 8695260 8696848 ECH