Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00394 ATGTGCAACCTAGCCCTGAATCCTCATTGTTCTCTAATCGTTGAAATTAGTAACTTGAATGATGAGAGTGGAGATGCCATTGAAGATTTGGATGATCACACTGAAGATGATGAAGGAGAAACAGCTGCTCCCCAGGCTCGTTATCCTTGGGAAGGGAGTGATTGTGCATTACGAATACGAAGAGGTGTGTTGTATGTTAATTACTTCTCTGCAATGCTGCTATAG 225 0.4222 MCNLALNPHCSLIVEISNLNDESGDAIEDLDDHTEDDEGETAAPQARYPWEGSDCALRIRRGVLYVNYFSAMLL 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00394 74 MobiDBLite consensus disorder prediction 23 45 - -
Cca05g00394 74 MobiDBLite consensus disorder prediction 23 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00394 Cca-Chr5 8688927 8693387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00394 15 54 Eukaryotic Initiation Factors Gene Family AT5G20920 57.143 3.09e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00394 K03238 - gmx:100775688 79.3369