Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00391 ATGGATCATTTGAAGAGACTGGTAATGGTTTTTGTTTTGGTTTTCTTTGCCATGAGGGTTCCCAAAACATCAGCTGTTAAAAATGGACGAGTTCCGGCCTTGTTTTCATTTGGAGACTCAATTCTTGATACAGGAAATAATAACCTCCTTCTCACATTAAGTAAGTGCAATTATCCTCCCTATGGAATGGATTTCTATGGAGGAATACCTACAGGAAGATTCTGTGATGGAAGAAACCCCTCAGATTTGATAGCGGAGGCTTTGGGAATCAAAGCAACGTTACCAGCATACCTGAGCGGTACCTTGAGGACTCAAGACCTCCCCACCGGAGTATGCTTTGCTTCAGGTGGTTCAGGGATTGATGATGTCACCTCTGCCATACAGGGTGTTTTATCACTATCAGCTCAACTGCGACTGTTCGAAGATTACATAGGAAGGTTGAGAGCACTTGTTGGACAACAACGTGCTTCTTACATCATATCCAATGCCTTGATCCTCATTTCCGCAGGCAACAATGACATTGCCATTACCTACTATGACACCTTAGTACACTTGCAACCTTTCCCTATGTACGCCGATCGTTTAGTTTTGGGAGCTTCTAATTTCGTCAAGAGTCTATATGCACTTGGGGTACGACGAGTGTGGGTACTAAGTACTTTGCCACTTGGATGTTTGCCTGGAGGAAGAACCATAGCGGGAGGACCTTTAAGGATTTGTGCGCCCATAGTGAATTTACAAGCACAGTTATTCAATGGCAAGTTAGCATCAGCAGTGTATTCTACCAGAGCAAGCTTTCCCAATTATGATATTAGGTTCATCGATGTCTATACTCCTCTCTATAATCTCGTGCAGAACCCTCTAAGTGCAGGGTTTTCAGACTCCTCAGAGGGTTGTTGTGGGACTGCAATATTTGGAGTTTCAGGACTATGTAACCTTCTCAGTGTGTGTCCATTTCCTTCCACATACATTTTCTGGGATTTTGCACATCCAACAGAGAGAGCTTATCGGTTTATTGTCTCTTCTATACTACGGAGGCAGGGTATCAATAATGTTTCAACCTCTTTTTCTTTTTCTCATGTCAATTCTTCTCTCGTACATTAA 1101 0.4278 MDHLKRLVMVFVLVFFAMRVPKTSAVKNGRVPALFSFGDSILDTGNNNLLLTLSKCNYPPYGMDFYGGIPTGRFCDGRNPSDLIAEALGIKATLPAYLSGTLRTQDLPTGVCFASGGSGIDDVTSAIQGVLSLSAQLRLFEDYIGRLRALVGQQRASYIISNALILISAGNNDIAITYYDTLVHLQPFPMYADRLVLGASNFVKSLYALGVRRVWVLSTLPLGCLPGGRTIAGGPLRICAPIVNLQAQLFNGKLASAVYSTRASFPNYDIRFIDVYTPLYNLVQNPLSAGFSDSSEGCCGTAIFGVSGLCNLLSVCPFPSTYIFWDFAHPTERAYRFIVSSILRRQGINNVSTSFSFSHVNSSLVH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00391 366 CDD SGNH_plant_lipase_like 32 343 IPR035669 -
Cca05g00391 366 PANTHER GDSL ESTERASE/LIPASE EXL3 6 347 - -
Cca05g00391 366 Pfam GDSL-like Lipase/Acylhydrolase 34 340 IPR001087 GO:0016788
Cca05g00391 366 SUPERFAMILY SGNH hydrolase 112 343 - -
Cca05g00391 366 Gene3D SGNH hydrolase 21 346 IPR036514 -
Cca05g00391 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00391 Cca-Chr5 8594160 8596769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00391 9 350 Pollen Coat Proteome AT1G75910 43.143 9.18e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00391 - - gmx:100789445 472.241