Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00387 ATGGTTGCTTTTATGAAGCTTCCTTCCTCACTGCTCCAATATTTCTTCTTATTGCTATCTGTTTTTGTGTGGAAAACAAGTTCAATTGTGAAACTCCCCCCAAATGTATCAGTTCCAGCAGTGTTGGTGTTTGGAGATTCAATCATGGACACAGGCAACAACAACAACTTGGTAACAACAGCTCGCTGCAATTTTCCACCAAATGGCATAGATTTTCCTGGAAGGGTCCCAACCGGTAGATTTAGTAACGGAAAGGTTCCATCTGATCTTATAGTTGAAGAATTGGGCATTAAAGAGTTTCTACCAGCATACTTGGATCCAAATCTCCAACCGGAGGAATTAGCCACCGGTGTGTGCTTTGCATCTGGTGGCGCCGGTTACGATTCATTGACATCGCAAACAGCGTCATGTATATCGTTATCGGGTCAAGTAAACTTGTTCAAAGAATACATAGGAAAGTTAAGAGGAGTGGTTGGAGAAGACAGAACGGAGTTCATCTTGGCCAACAGTATATTTATTGTGGTATTTGGAAGCAACGACATTTCCAATACATACTTCTTGTCTCGTATTAGACAACTGCAATATGATCTTCCTGCATATACTGATCTTATGCTCAGCTCAGCTTCCAATTTCTTGAAGGAGATATATGAACTAGGGGCACGGAGGATTGGAGTATTCAATGTACCGCCGATTGGGTGTTTGCCATTTCAGAGAACTGCAGCAGGAGGAAAAGAAAGAAAAGTTGTAGTAAACTATAACAACGCAGTACAGTTTTTCAACGCCAAATTGTCAGATCAACTCCATTCTCTTAATCACAACCTTCCAACTAGCAGGATCGTCTACATTGATGTTTACAGCCCTCTCCTCGACATCATTCTAAACTACAAAAAATATGGTTATAAATTCGGAGACAGAGGGTGCTGTGGCACGGGTACAATAGAGGTTCTGTTATTATGCAACCATTTAACTCCCTTGTGTTCCAACGACTTGGAGTATGTGTTTTGGGACAGTTTTCACCCTACTGAAAGCGTTTATAAGAAGCTCATGGCACCTATTCTTAGAAAATATTTGACTGAACTTTTGTGA 1086 0.4098 MVAFMKLPSSLLQYFFLLLSVFVWKTSSIVKLPPNVSVPAVLVFGDSIMDTGNNNNLVTTARCNFPPNGIDFPGRVPTGRFSNGKVPSDLIVEELGIKEFLPAYLDPNLQPEELATGVCFASGGAGYDSLTSQTASCISLSGQVNLFKEYIGKLRGVVGEDRTEFILANSIFIVVFGSNDISNTYFLSRIRQLQYDLPAYTDLMLSSASNFLKEIYELGARRIGVFNVPPIGCLPFQRTAAGGKERKVVVNYNNAVQFFNAKLSDQLHSLNHNLPTSRIVYIDVYSPLLDIILNYKKYGYKFGDRGCCGTGTIEVLLLCNHLTPLCSNDLEYVFWDSFHPTESVYKKLMAPILRKYLTELL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00387 361 Pfam GDSL-like Lipase/Acylhydrolase 41 349 IPR001087 GO:0016788
Cca05g00387 361 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 15 357 - -
Cca05g00387 361 SUPERFAMILY SGNH hydrolase 167 353 - -
Cca05g00387 361 CDD SGNH_plant_lipase_like 39 356 IPR035669 -
Cca05g00387 361 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 41 52 IPR008265 GO:0006629|GO:0016298
Cca05g00387 361 Gene3D SGNH hydrolase 32 356 IPR036514 -
Cca05g00387 361 PANTHER GDSL ESTERASE/LIPASE EXL3 15 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00387 Cca-Chr5 8456883 8468761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00387 35 354 Pollen Coat Proteome AT1G75910 39.319 1.69e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00387 - - mtr:MTR_1g025680 551.977