Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00368 ATGTACATCGTTCTTCACAAGATCAAAACGCTAATTGAAGATTGCTCCAATGGAAGAAGTAAGTTCAATCTGCTCGTGCAAGTCGCCGACAACTTTCACTGGCGCTCACCGGAGAACTCTCCACTCTCCTCGATATATGTTTCCTCACCAACACCCCCAACTTCCTCCTGTACCATCCGCAAAACGCAGCTCCTTTGCGTCGTTTTCAAGGAGCTGATTTGCGTTTCCAATTCCAACTCTGTTTTGTTCTCCTACTCTCTCATCCTCTGCCTCGAAAAAATGTACATCGTTCTTCACAAGATCAAAACGCTAATTGAAGATTGCTCCAATGGAAGAAGTAAGTTCAATCTGCTCGTGCAAGTCGCCGACAACTTTCACTGGCGCTCACCGGAGAACTCTCCACTCTCCTCGATGTTTTCCCTCTCCAAGAACTCCACCTAA 441 0.4649 MYIVLHKIKTLIEDCSNGRSKFNLLVQVADNFHWRSPENSPLSSIYVSSPTPPTSSCTIRKTQLLCVVFKELICVSNSNSVLFSYSLILCLEKMYIVLHKIKTLIEDCSNGRSKFNLLVQVADNFHWRSPENSPLSSMFSLSKNST 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00368 146 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 54 123 - -
Cca05g00368 146 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 1 30 - -
Cca05g00368 146 PANTHER U BOX DOMAIN-CONTAINING 54 123 - -
Cca05g00368 146 PANTHER U BOX DOMAIN-CONTAINING 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00368 Cca-Chr5 8093389 8094868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00368 59 126 U-box Gene Family AT5G01830 49.296 1.35e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00368 - - cam:101506886 93.2041