Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00367 ATGTACATCGTTCTTCACAAGATCAAAACGCTAATTGAAGATTGCTCCAATGGAAGAAAACTCCACCTAAACGACCAGATCAAGCACGAGATCGTTCCCGATCAAGCGCATCTCTCTTTGATTTTCGACAAACTAGAGATTCGCGACGAGTCCAGCTGCAGAGCGGAGATCGAGAGCCTCGAGGAAGAGATTATCAATCGGAGCGAGGAACAATCCAAAACGGACCTCATCACGTTGATCGGCCTCGTTCGTTTCGCCAAGTGCGTTCTCTTCGGCGCGTCAACGCCGTCGCCGAGAGCCGCCGTTCTGCGGCGGAACCAGTCGTCGGAGCTAGCGATTCCGGCGGATTACCGGAAGGCGGCGACGCTATTGAGGATTTTGCAGCGGGGCTGGATGCCGGAGAGAGTGAGGGATTCTCAACTACTACCATGgtga 435 0.531 MYIVLHKIKTLIEDCSNGRKLHLNDQIKHEIVPDQAHLSLIFDKLEIRDESSCRAEIESLEEEIINRSEEQSKTDLITLIGLVRFAKCVLFGASTPSPRAAVLRRNQSSELAIPADYRKAATLLRILQRGWMPERVRDSQLLPW 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00367 144 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 22 119 - -
Cca05g00367 144 PANTHER U BOX DOMAIN-CONTAINING 22 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00367 Cca-Chr5 8080281 8084111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00367 27 123 U-box Gene Family AT5G01830 47.959 4.61e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00367 - - ccaj:109795803 219.164