Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00365 ATGGCCTTCTCCAAGGCTCTCATGGCTTCAATCCTCATTTCTCTAGTCATTCTAAATCTTGTGGAGTCAAATACAATGGTAATCTGGAACACACTCGAGGGATCAAGTTCTAGTCCTGCCCCGCCAAAGATAGATTGTGATGGTGAATGCAAAAGAAGGTGTGAGTTATCATCGAGACAAAACCTGTGTAAGAGAGCATGCGGCACGTGCTGTGATCGATGCAATTGTGTGCCTTCGGGTACTTCCGGTAACTACGATGAGTGTCCATGCTATGCAAATATGACTACCCACGGAGGAAGACACAAATGCCCTTAA 315 0.4571 MAFSKALMASILISLVILNLVESNTMVIWNTLEGSSSSPAPPKIDCDGECKRRCELSSRQNLCKRACGTCCDRCNCVPSGTSGNYDECPCYANMTTHGGRHKCP 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00365 104 PANTHER SNAKIN-2-LIKE 1 104 - -
Cca05g00365 104 Pfam Gibberellin regulated protein 45 104 IPR003854 -
Cca05g00365 104 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00365 Cca-Chr5 8005320 8006194 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00365 - - gmx:100306171 174.096