LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca05g00338	ATGCGTGTGCCAGCAGCCACGCTCGCTGCAATTGGGGCGGGCCTCGTGCTTCTGGGGAACAATAGAGACCTGGGCACTGTAGAGAAATTGGGGGTGCAATTGCGGACTACAATGTTTGTCACTTTAAGATgttcctccgcgcctgccaaaggtaaaggcaaagcgcggggcaaggcggcggctaccggaacggtcgccatcgggaaaaagaaggaggtggcaccgccagcggacctcgttccaggcataatgggcaagagtaagtggcgcgagctgaagcaccgctacaatgttgtcgagctcgaggttcccgagcctcaagaggaggaggtgtcccccctgaaggcagggatagctgccaaggtggagggcctggttgctgagcaggtcgcccaggctgccaaggaaggggacgctgctgaggtccaggtgcctccgaggtcggagatgccgagcgtggacccccctgtcgccgagcaggagacgcccgtttccgcttctattgagacacgcgTCCAAAACGACAAGATTCAAGGAACATTCCTTAAAAAGGATGACCCAAAGATAAACGCATTGATGCAACAAGCAGAGTTACTAAGTTCACTAGCTCTTAAAGTTGATGCAGAGAACGTGGACCAAAGTCTTGAAAATGCATGGAAGGTGAGGCTTGATAGTAAACTTGCTTTTGTTTTGATTTTTTGA	702	0.1994	MRVPAATLAAIGAGLVLLGNNRDLGTVEKLGVQLRTTMFVTLRCSSAPAKGKGKARGKAAATGTVAIGKKKEVAPPADLVPGIMGKSKWRELKHRYNVVELEVPEPQEEEVSPLKAGIAAKVEGLVAEQVAQAAKEGDAAEVQVPPRSEMPSVDPPVAEQETPVSASIETRVQNDKIQGTFLKKDDPKINALMQQAELLSSLALKVDAENVDQSLENAWKVRLDSKLAFVLIF	233

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca05g00338	233	MobiDBLite	consensus disorder prediction	137	164	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca05g00338	Cca-Chr5	7286509	7291996	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca05g00338	178	224	MYB Transcription Factor Family	AT1G14350	74.468	4.73e-16	74.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca05g00338	K09422		-	gmx:100807667	94.3597