Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00300 ATGGGTTCAAAATCCGAAACCGTTTGCGTTACCGGAGCTGCTGGTTTCATCGGTTCATGGCTTATCATGAGACTCCTCGAGCGTGGCTACACCGTTCGAGCCACCGTACGCGACCCAGCTAACATGAAGAAGGTGAAGCATTTGCTGGATCTGCCACAAGCAAAGACACATCTATCTCTATGGAAGGCTGATCTTGCTCATGAGGGAAGCTTTGATGAAGCCATTAAAGGCTGCACTGGAGTTTTCCACGTCGCCACCCCCATGGACTTTGAGTCCAAGGACCCTGAGAATGAAGTGATAAAGCCAACAATAAATGGATTACTAGACATCATGAAAGCATGCGAGAAGGCCAAAACTGTGCGAAGGCTTGTATTCACATCCTCAGCCGGAACTGTGGACGTTCCTGAGTACGATGAGAATTGCTGGAGTGATGTTGAGTTCTGCAGAAGGGTCAAAATGACTGGCTGGATGTACTTCGTTTCAAAGACCCTTGCAGAGCAAGAAGCATGGAAATTTGCAAAAGAGCATAACATAGACTTCGTTTCAGTGATTCCACCCCTTGTGGTTGGCCCCTTTCTTATGCCAACGTTGCCACCTAGCTTAATCACTGCTCTTTCACTCATCACAGGAAATGAGTCACATTACCATATCATAAAGCAAGGCCAGTTCGTTCACCTAGATGACCTTTGTCTTGGTCATATATTCCTGTTCGAGAATCCAAAAGCTGAAGGAAGGTACATATGCTCCTCACACGAGGCAACCATTCATGACATTGCAAGACTGCTTAACAAAATATACCCACAGTACAATGTCCCTACAAAGTTCAAGAATATTCCAGATGAATTGGAAATTATCAGATTTTCTTCAAAGAAGATCACAGACTTGGGCTTCAAATTTAAGTACAGCTTAGAGGATATGTTCACAGGGGCCGTTGAAACCTGCATAGAAAAAGGGCTTCTTACTAAACCTGCAGAAACTCCAGTTAGTGGCACCACGCAGAAATAA 1005 0.4488 MGSKSETVCVTGAAGFIGSWLIMRLLERGYTVRATVRDPANMKKVKHLLDLPQAKTHLSLWKADLAHEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTINGLLDIMKACEKAKTVRRLVFTSSAGTVDVPEYDENCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHNIDFVSVIPPLVVGPFLMPTLPPSLITALSLITGNESHYHIIKQGQFVHLDDLCLGHIFLFENPKAEGRYICSSHEATIHDIARLLNKIYPQYNVPTKFKNIPDELEIIRFSSKKITDLGFKFKYSLEDMFTGAVETCIEKGLLTKPAETPVSGTTQK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00300 334 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 325 - -
Cca05g00300 334 Pfam NAD dependent epimerase/dehydratase family 8 242 IPR001509 -
Cca05g00300 334 Gene3D - 1 332 - -
Cca05g00300 334 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 3 325 - -
Cca05g00300 334 CDD FR_SDR_e 8 297 - -
Cca05g00300 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 314 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00300 Cca-Chr5 6287786 6291799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00300 1 315 Miscellaneous Gene Families AT1G09510 42.025 3.00e-83 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00300 K13082 - gmx:732626 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00300 05 6287786 6291799 Cca05g00300 05 6287786 6291799 ECH