Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00296 ATGGGTTCTCTTATGGCAGGATGGTACTCTACCCACATGGATCCTAAATCAGCCACACTTAAAAGGAACCGCTCACTCACCAAAGATGAAATTGATGCATACTGGAAATCAAAGAAGAAGATAGAGGAAGAACACCTTAAAGCTATTTCCAGCTTATCAGACACTATTCAGGTTAGCAAATACACAGAGCCAGAGAAGAAGCTTCAGAAGTCAATGACCATGCCCGTGACCCGCACACGGGACCACGTAAGTATGGACATTGACACAAGTTTGGAGCAGCTTATAAAGAAAAATGGCTGGTGGACCAAGAGTAGCTGGGCATTTCTGAATGAGCCTCCAGTGATTGAAGCTGCGTCCAATAAGTATACATCGCAGTTTCATGTTGCAAACTTGGGATCATCGAAATTTAACCCCCAAGATGGAATTAGTGCTTGA 435 0.4368 MGSLMAGWYSTHMDPKSATLKRNRSLTKDEIDAYWKSKKKIEEEHLKAISSLSDTIQVSKYTEPEKKLQKSMTMPVTRTRDHVSMDIDTSLEQLIKKNGWWTKSSWAFLNEPPVIEAASNKYTSQFHVANLGSSKFNPQDGISA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00296 144 PANTHER - 1 143 - -
Cca05g00296 144 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00296 Cca-Chr5 6222138 6223787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00296 - - gmx:100798264 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00296 05 6222138 6223787 Cca05g00296 05 6222138 6223787 ECH
Cca05g00296 05 6222138 6223787 Cca07g00354 07 4678134 4679377 PCT