Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00294 ATGCCACAAAGAAGTAAGTCATTTCGTTTTAGGGTTCCATGGTTATCAGTGCCATCTGAATCATCCTCTCGTCGCACAAAAGATAGACCAAAATCTCCTCCTCACTCAGACACAAGTGTACCTATTCAAAGACCATTTAAGCCTTCTATGGTAGCCCCTTCAGAGTTATCTCCTCCTAGTCCTACCAAAATTGGAGAAGCCTTAAACGATGAACCTAAAAAATATCCAAAACAGACACCACCATCTTCATTGATCATTGAGTCTCCAGTTTCTACTCGGCCAAAACCCCCTTCTCCACAGACTCCACTTCAACCTTCACCTCATGCAAATTCTCCACCTCAAGTTCAAGTTGCATCCTCACCCCTCAAAACTCATTTGACTTCTGATAATGGAGCCATGAAAGTGTCAAAGCCTGTTGCTGAAAAAATCACTCCTGAATCATCTCCCTTTGAACAAGAAAAGGAAAAGATGGTATTGTCTGAACCACAACCAAAAGAAGCTGAGCCAAAGGTAAAATCACCATTGACAACAATCACCAAGTCAGCAGAAACCTCTTTTCAACCTGAGAGGAAGTCAACACAACCAGCAGACTCTGAACAACAAGTATCTTCTATGCCCACTTCATCCCCAGTTTCAAAAACTGAACCAACCACAACCACTCACCCATTATCTCCTTTGGCCTCAAAGGACATCAAAACTGAAGAAACCACTCAACCATCATCTCCTTTGGCCTTAAAGGAAATCAAAACTGAAGAAACTGCTCCTCAAGAAGAAAAAGAAAAGATGGAAGTGCTAACTCCACAAGAAGAAAAACCAAAGATAAAGTCACCTTTGAAAACCATCCCCAAGTCACTAGAGACCTCTTCTCAACCTGAGAATCTATCCACACCACCTACAAAAATTGAGCAAAGATCAACAACCCTAAAGGCCCCTTTGGAAACACAAAGCAAGTTCCTTCAACCTGAAGAAAAGGAGAAAGTGGTGCATGAAACCACCAAGGCACGAGGAAAAGGCAAAGACACAACCACCACAGCATCTGCTTCCGGAATAGCAACAACAAAGGCTAGAGATTCATCTGCCAAGGCATTTCGTGGTAATAAGAAGCATCATGGAGTGCGGGAAACTGTTGAGAGAAAAATAATGTTTGCCACAACCAACCCCATTGGGAAAGACACAAAAGTTATGAGCTCAACACATGAAGGGACAAAGAATACGTCAAGCTCAAGCATATCACCCGAAAAAACTACTTCCTTTAGTGGGGCAGAGGCTCCTCCTCTACAAAAGGGCATCAAAGATGATATCACAAAGTTTGTTCATAAACTAACAACCTCAGTGCACCCTACACAAGCCATGGATGAGAAACAATTTAGTGTCATAACCTTGGCTGGTGACAATAGAGGAGCCACAATGCACTTAGGTTCTGAGACAGTTAATAAAGAGGGTTCAATCCACATACATAGAGCCTACAAGAGTGATCATGAAGAGGCCAATGAGGTGACCACTGATGGAGACGAAAACACTAATGAAGAAGAAGATGAAGAGGTGGGGATGGCATATGTCAACAGCAACATACAAAGTATCAATAACTCACTCATGTTTAATGGTTCAATCAATGAAAGAGACCCTGGTGTTCAAGTTACTCTTCCACAAAAGCCCACTGAGCCCATTAGGCCTGATGATGAACCCAAGCCTAGCTTGGACACTCAGAAGACTCAGTTTAATATCAACCGGGCTAAGTCATCATACCAGCCCACGGTTGGAAGAAGCATCAGAGGTTGCAGGTTCAGTTGTGACCAGGATATTGAAGACATTGAGATTCTGTGA 1824 0.4276 MPQRSKSFRFRVPWLSVPSESSSRRTKDRPKSPPHSDTSVPIQRPFKPSMVAPSELSPPSPTKIGEALNDEPKKYPKQTPPSSLIIESPVSTRPKPPSPQTPLQPSPHANSPPQVQVASSPLKTHLTSDNGAMKVSKPVAEKITPESSPFEQEKEKMVLSEPQPKEAEPKVKSPLTTITKSAETSFQPERKSTQPADSEQQVSSMPTSSPVSKTEPTTTTHPLSPLASKDIKTEETTQPSSPLALKEIKTEETAPQEEKEKMEVLTPQEEKPKIKSPLKTIPKSLETSSQPENLSTPPTKIEQRSTTLKAPLETQSKFLQPEEKEKVVHETTKARGKGKDTTTTASASGIATTKARDSSAKAFRGNKKHHGVRETVERKIMFATTNPIGKDTKVMSSTHEGTKNTSSSSISPEKTTSFSGAEAPPLQKGIKDDITKFVHKLTTSVHPTQAMDEKQFSVITLAGDNRGATMHLGSETVNKEGSIHIHRAYKSDHEEANEVTTDGDENTNEEEDEEVGMAYVNSNIQSINNSLMFNGSINERDPGVQVTLPQKPTEPIRPDDEPKPSLDTQKTQFNINRAKSSYQPTVGRSIRGCRFSCDQDIEDIEIL 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00294 607 MobiDBLite consensus disorder prediction 318 337 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 281 314 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 1 427 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 360 377 - -
Cca05g00294 607 PANTHER OS01G0106600 PROTEIN 3 576 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 147 168 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 389 422 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 92 109 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 174 244 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 110 131 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 338 355 - -
Cca05g00294 607 PANTHER OS01G0106600 PROTEIN 3 576 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 537 569 - -
Cca05g00294 607 MobiDBLite consensus disorder prediction 250 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00294 Cca-Chr5 6174987 6177084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00294 - - gmx:102669458 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00294 05 6174987 6177084 Cca07g00356 07 4679903 4680994 PCT