Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00292 ATGCTGCTGCCATATACTACTGTCTCAGAGTTCAACTCTACAGTTAAGATGTCCACAGTTTTGGAGATTCCAATTCCAAGCTATTGTGAAGTTAAGGTACACCGTTCAATATGCTTAGAACTTCATAGACTCATGGAAAGAATTTTGCATGTAATTTTAGCCATCGAATCTGCCAGACCAAATTATACGTTAGCGATGCAGACATTGTGCTCATTACACTCCACTTTGGCTAAAGCCAAGTCAGTTATCAAACATTGTTCCGAGTGCAGCAAACTCTACCTGGCAATCACATCGCATAAGATACTTTCAAGATGTCAAAAAATAAGAAATGCTTTTGAGTTGTACTTGGCTCAGATTCAAAATGCAGTTCCAATACCATTGGCTTCTAAGATTTCTGCAATACTACACGACCTTAGGGACATAGAATTTTCCCTGGAATTTGAAGAAGAGGAGGCTAGGAAAGTAGTACTTTCACTACTTGAGAAGAATTTTCCTGATTCAGCTTCTATGGAAAAGGAAGAGCTTGAAGCTATTCAAGATGCAACATCGAGGTTGGAGATCAAATCCCCTTTCTCTTTCTTGCTAGAGAAAGCAACTCTTAAGAGGCAACTTGAACAAGTCAATGGAACAAATCTAAAGGAGAAGCAGCTTCTAGAATACCTTTTGTATCTCTTGATCAAATATAGGAAATCCATTTGTCAGATTCAAGATGGAAGCCACTCTTCGAAAGATGAAAGTTTAAACCAATTATTTGAGCACAAGTTGGTTGTGGAGGAAGCAATGAGTGAGAATCAAGTAAATGACTCCCTTAACCCAAAAGTTGAAGATCTATGA 834 0.3825 MLLPYTTVSEFNSTVKMSTVLEIPIPSYCEVKVHRSICLELHRLMERILHVILAIESARPNYTLAMQTLCSLHSTLAKAKSVIKHCSECSKLYLAITSHKILSRCQKIRNAFELYLAQIQNAVPIPLASKISAILHDLRDIEFSLEFEEEEARKVVLSLLEKNFPDSASMEKEELEAIQDATSRLEIKSPFSFLLEKATLKRQLEQVNGTNLKEKQLLEYLLYLLIKYRKSICQIQDGSHSSKDESLNQLFEHKLVVEEAMSENQVNDSLNPKVEDL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00292 277 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 5 37 248 - -
Cca05g00292 277 Gene3D - 25 123 IPR036537 GO:0007166
Cca05g00292 277 PANTHER U BOX DOMAIN-CONTAINING 37 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00292 Cca-Chr5 6165310 6167935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00292 32 201 U-box Gene Family AT4G36550 41.176 2.20e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00292 - - ccaj:109811990 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00292 05 6165310 6167935 Cca05g00292 05 6165310 6167935 ECH