Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00214 ATGAAGGAGGTCAATTTAATTCCTGATGATCCTTCTTCTGCTGAGTGCATAAAACAACTGGAGCAGGAAATCAAAATTCTCCGTCAACTACACCACCCCAACATTGTGCAGTATTATGGAAGTGAAACAGTTGGCGATCATTTGTACATATATATGGAGTATGTCCATCCAGGGTCAATCAGTAAATTTATGCGTGAACATTGTGGAGCTATGACAGAATCTGTGGTTCGCAACTTTACGAGGCATATTCTCTCTGGATTAGCTTACTTACATAGTAACAAACCCATCCACAGAGATATCAAAGGTGCAAACTTGCTGGTCAATAAATCAGGCATTGTCAAGCTTGCAGATTTTGGGCTGGCAAAAATAAATATTTGA 378 0.3942 MKEVNLIPDDPSSAECIKQLEQEIKILRQLHHPNIVQYYGSETVGDHLYIYMEYVHPGSISKFMREHCGAMTESVVRNFTRHILSGLAYLHSNKPIHRDIKGANLLVNKSGIVKLADFGLAKINI 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00214 125 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
Cca05g00214 125 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 123 - -
Cca05g00214 125 SUPERFAMILY Protein kinase-like (PK-like) 10 123 IPR011009 -
Cca05g00214 125 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00214 125 Pfam Protein kinase domain 14 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00214 125 SMART serkin_6 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00214 125 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00214 Cca-Chr5 4594907 4596295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00214 1 122 MAP Kinase Kinase Kinase AT5G66850 78.689 6.14e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Cca05g00214 Pkinase 4.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00214 - - ccaj:109817424 256.529