Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00173 ATGCATGGCGTGATGGTGATGGTGATGCAgccttTTCGAGGACCTCCCCCTCCATTGTCGCCTCTCAACCTTCCTCGTGACCTTTGCCCTCCGCCTAACCCACATACTGATCCAAATGCCACCTTAATTCCCAATATTACGTTCTCAACTACTGACCCATTACTCCATCAGCCTCTCTCTTCATCTGAGCCGTCTACTTTGAATCCAACGGACATACCTTTTCCCCTCCCACCTAACCCCACTAAAGTCACTTCGACTTCCGCAAGCACGCACGTGTCCGCAATTGATCCCACGAGTGCTACGGTTTCATCTAGACCATTCCTTACAAACACAAATTCATCCTCACCGCATAATGCAACCGTGATCCGTGACTCCCACACTCCCACCAACCAGCTGCTGCCACCTCATGATATGGCCCTTGTGgaccttgaggacaagCACAGGTACTGGTACGTCGTCGAAAAACACTTCCCTCCCACTTCATGCAATCGCAAGCTCATCGGAGCTCACTACTTCTACGCTGGCTACGAAGCCACCAATGACAAAATGAACAACACCCTCGAGTatctcgtccaaggagggcacctcggacaatacgtccaacgacaataa 612 0.4542 MHGVMVMVMQPFRGPPPPLSPLNLPRDLCPPPNPHTDPNATLIPNITFSTTDPLLHQPLSSSEPSTLNPTDIPFPLPPNPTKVTSTSASTHVSAIDPTSATVSSRPFLTNTNSSSPHNATVIRDSHTPTNQLLPPHDMALVDLEDKHRYWYVVEKHFPPTSCNRKLIGAHYFYAGYEATNDKMNNTLEYLVQGGHLGQYVQRQ 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00173 203 MobiDBLite consensus disorder prediction 103 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00173 Cca-Chr5 3910515 3915823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00173 146 189 Subtilisin-like Serine Gene Family AT3G14240 50.000 2.80e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00173 - - gmx:100784180 68.1662