Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00172 atgcctcctcgcaaggataccgacccaaagccgaccgatgaggctatttcagcactcacAGAGAAGCTTAATGCTCTCCAAACCCAGTTGGACCTTCAACATCAAACCCAAGAATCTCGTCATGATTCCCTCACCACACTCATGGCCACCTTTTTGGAACGTTTTCCCCAACAATTTCATCCACCTGAcccctcaccttctatatcccttcccatcccatccccgccttTTCGAGGACCTCCCCCTCCATTGTCGCCTCTCAACCTTCCTCGTGACCTTTGCCCTCCGCCTAACCCACATGCTGATCCAAATGCCACCTTAATTCCCAATATTACGTTCTCAACTACTGACCCATTACTCCATCAGCCTCTCTCTTCATCTGAGCCGTCTACTTTGAATCCAACGGACATACCTTTTCCCCTCCCACCTAACCCCACTAAAGTCACTTCGACTTCCGCAAGCACGCACGTGTCCGCAATTGATCCCACGAGTGCTACGGTTTCATCTAGACCATTCCTTACAAACACAAATTCATCCTCACCGCATAATGCAACCGTGATCCGTGACTCCCACACTCCCACCAACCAGCTGCTGCCACCTCATGATATGGCCCTTGTGgaccttgaggacaagCACAGGTACTGGTACGTCGTCGAAAAACACTTCCCTCCCACTTCATGCAATCGCAAGCTCATCGGAGCTCACTACTTCTACGCTGGCTACGAAGCCACCAATGACAAAATGAACAACACCCTCGAGTATCGCTCCCCCATAGACTCTGACGGCCATGACACCCACACCGCCTCCATCACCGTCGGAAGGTACGTCTTCCTGACCTCCACCATGGGCTACGCCAAAGGAATGGCAGCCGAGATGGCTCCCAAGGCTCACCTCGTCTATTGGAACATCAACTACTACGACTCTGACATTCTGGCTGCATTCGACGCTGTCGTGGCCGACAGCGTGGAGGTGATCTCTCTCAGCGTGGGGGGCATGGTGGTGCCTTACCACCTGGACGTCATTATTGTGGGGGCCTTCGAAGCCAGCAAGGATGGCGTCTTCGTCTCCGCCTCCATGGGGAACAACGGTCCCGGCGTCCTGACGGTGACGAATGTGGCACCCTGGATGTTGGCGTATGTGGCAAAGAAGTCGTCAATCCAGGTGACAATTTGTTTGAATTTTTGGTCAAACTCGCGCAAACCATGGAGCAAAAAAATGTCGTACAGAAGTCGTCAACACTGTTAA 1245 0.4747 MPPRKDTDPKPTDEAISALTEKLNALQTQLDLQHQTQESRHDSLTTLMATFLERFPQQFHPPDPSPSISLPIPSPPFRGPPPPLSPLNLPRDLCPPPNPHADPNATLIPNITFSTTDPLLHQPLSSSEPSTLNPTDIPFPLPPNPTKVTSTSASTHVSAIDPTSATVSSRPFLTNTNSSSPHNATVIRDSHTPTNQLLPPHDMALVDLEDKHRYWYVVEKHFPPTSCNRKLIGAHYFYAGYEATNDKMNNTLEYRSPIDSDGHDTHTASITVGRYVFLTSTMGYAKGMAAEMAPKAHLVYWNINYYDSDILAAFDAVVADSVEVISLSVGGMVVPYHLDVIIVGAFEASKDGVFVSASMGNNGPGVLTVTNVAPWMLAYVAKKSSIQVTICLNFWSNSRKPWSKKMSYRSRQHC 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00172 414 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 205 381 - -
Cca05g00172 414 Gene3D Peptidase S8/S53 domain 223 383 IPR036852 GO:0004252|GO:0006508
Cca05g00172 414 MobiDBLite consensus disorder prediction 59 80 - -
Cca05g00172 414 MobiDBLite consensus disorder prediction 56 80 - -
Cca05g00172 414 Coils Coil 16 36 - -
Cca05g00172 414 MobiDBLite consensus disorder prediction 168 198 - -
Cca05g00172 414 Pfam Subtilase family 225 371 IPR000209 GO:0006508|GO:0008236
Cca05g00172 414 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 205 381 - -
Cca05g00172 414 MobiDBLite consensus disorder prediction 168 197 - -
Cca05g00172 414 SUPERFAMILY Subtilisin-like 222 389 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00172 Cca-Chr5 3879326 3885934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00172 211 376 Subtilisin-like Serine Gene Family AT3G14240 65.882 1.53e-68 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00172 - - gmx:100813247 249.595