Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00137 ATGGAAAGTGGATTACCCTTCCTTGACTGTCTCCTACAGCACACTCTCAGAAGCATTTGCTCTTTTCCCACTTCCCCAACTTCTTCTAAGTGGGTGTATGCTGTTTTCTGGAGGATAGTACCCAGAAACTTCCCTCCACCTAGGTGGGAATTTGGAGGGACAGCTCTTGATCGCTCAAAGGGAAATAAAAGAAACTGGATCCTTGTATGGGAAGATGGGTTCTGCGATTTTAATGAATGTGAACAAGGGAGGAGTGGATACCTGAACCACAGTTTTGGACCTGACGTATTCTTCAAAATGTCTCATGAGGTTTATAGTTATGGAGAAGGATTACTGGGGAAAGTGGCTGCGGATAATAGTCACAAGTGGGTTTATAGAGACACTCACAGTGGGTGTGAACCTAACTACATTGGTGCGTGGAATTCTTCAATCGATCATCAACCAAGGACGTGGGAGTTTCAGTTAAATTCAGGTATTCAGACTATTGCTGTCATTGCTGTCAGAGAAGGCCTAGTACAACTTGGTTCATTTAACAAGATTGCTGAAGATCTCAATTTGGTGGTCAACATTCAAAGGAAGTTCAGCTACCTCCACAGCATACCAGGTGCATTTTCCATCCAAAGACCACACCTACCCATTCAGCCTCCATGCATTGCCAAAACCAATAATCACCACATGATGGAAAGCAATGAAAAGACTCTATCTACCTATAACAACAACAACCAAGTAACAAGGGTCAATGCATTGCATGAGGAAAGGTCCAGCTTCTTTTCCATGTTAGCCATCAACTTGGGTAGGAATCCACCACCCCAAAATGGaacaacaacaacacaacaaGGGTCACCTCTTTGGTCACCTCCTTGGTCACCTCCACCTTCCTTGCCAAACATGTCTTGCAGCTTTGGAGCTATGCTGTCAAAGCTTCCATCTGTAACTCCTTCCAATAATCATGCTCAAGTTCCTCAAATCAATAGGATTAACACCACAGGCCACAAGCTGAAGATTGAGGAGTTCAGATTTCATTTTGCTGACGATGAAAGGAAAAGTACTAACAACACATTCTTTTAA 1068 0.427 MESGLPFLDCLLQHTLRSICSFPTSPTSSKWVYAVFWRIVPRNFPPPRWEFGGTALDRSKGNKRNWILVWEDGFCDFNECEQGRSGYLNHSFGPDVFFKMSHEVYSYGEGLLGKVAADNSHKWVYRDTHSGCEPNYIGAWNSSIDHQPRTWEFQLNSGIQTIAVIAVREGLVQLGSFNKIAEDLNLVVNIQRKFSYLHSIPGAFSIQRPHLPIQPPCIAKTNNHHMMESNEKTLSTYNNNNQVTRVNALHEERSSFFSMLAINLGRNPPPQNGTTTTQQGSPLWSPPWSPPPSLPNMSCSFGAMLSKLPSVTPSNNHAQVPQINRINTTGHKLKIEEFRFHFADDERKSTNNTFF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00137 355 MobiDBLite consensus disorder prediction 266 289 - -
Cca05g00137 355 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 194 IPR025610 -
Cca05g00137 355 MobiDBLite consensus disorder prediction 266 283 - -
Cca05g00137 355 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 332 - -
Cca05g00137 355 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00137 Cca-Chr5 3233000 3235444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00137 13 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.796 1.32e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00137 - - gmx:100807289 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00137 05 3233000 3235444 Cca05g00137 05 3233000 3235444 ECH