Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00129 ATGTGTATTGAAAATGCCATACTCAAAGCTGAGGTAGAGAAGCTCCAAGTAGCTTCAGGGAAATACGCACCAAGAACAATGTCCCCTTCATGTTCTTCTGGCCATGACCAAGAGAATAAAAGCACTTTGGATTTTTACGCTGAAATTTTCGGACTTGATAAGTCAAAGATAATGGAAGTAGTAAACCAAGCAATGGAGGAGCTCAGTAAGATGGCTACCGTGAGGATACTGCAGTGGCTTCACAGCTTTGAGAATGGTCGTGAAATACTTGATTATGATGAAAATGTGAAGGAATTTGCTGTTGAAAATTAA 312 0.3974 MCIENAILKAEVEKLQVASGKYAPRTMSPSCSSGHDQENKSTLDFYAEIFGLDKSKIMEVVNQAMEELSKMATVRILQWLHSFENGREILDYDENVKEFAVEN 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00129 103 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 3 101 IPR042160 -
Cca05g00129 103 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 3 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00129 Cca-Chr5 2999461 2999872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00129 3 99 Homeobox Transcription Factor Family AT1G79840 51.020 1.32e-23 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00129 K09338 - gmx:100808292 154.066