Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00120 ATGGCTTCACGTGATTGTGGCGCACCATACGGAGGCATAGAAAGTGGTTGTAGCATATGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTTCCTGTTAACCGAGCCCTTGCATTATCGCTCACTGTGAGTTTCAATGGCATTAGTGCAGCACTCTACACCCTTGCTGCCAATTCAATTGACCCTTCATCTGATTCACTGTATCTGCTTTTGAATGCTCTTGTTCCCCTTCTCATTTGCATTGCAGCACTTGTTCCTATTCTTCGCCAACCGGCTCTAGACCCTCTCCCTCCTGATGCAGTGAACCGGGACTCAGTAATATTTCTAATATTGAACTTCTTAGCCATTTTAACTGGCCTTTATCTTCTCCTGTTTGGCTCATCTGCTTCTGGTGTGACTTCTGCTCGGCTCTATTTTTGTGGAGCTATTCTTCTCCTCATCTTCCCATTATGTATTCCTGGCATTGTATATGCTCGTGCTTGGTTTCGCCGTACCATCCATTCCAGCTTCCGGATGGAAAGTGCTAGCTTCATTCTTGTTCATGATGATGATCTTGAGATGCATAAAGAGCTCCATAGCCGTCAAAATAGTATTGTTAGCAATGGAGATACTTACGGCCTGCTAAGTGACAATGGACACTTGTTTGGAAGTCAGAAGGAAAAAGATAGCGATTTGTGTTGTGAGAGGGTGATTGGCCAGGATCAGTTAGCAGTGCTAGGAGAAGAGCACCCAGCTGCAGTAATTGTCCGCAGATTGGATTTTTGGCTATACTATATTACATACTTCTGTGGAGGTACAATTGGTCTAGTCTATAGCAATAATCTGGGACAGATTGCTCAATCTCTGGGCAAGAGTTCAAATACTTCTACACTTGTTACACTCTATGCATCCTTTTCCTTTTTTGGTCGCTTGCTTTCAGCTGCACCAGATTACATTCGAAATAAACTCTATTTTGCAAGGACTGGTTGGCTATCAGTCGCACTTATACCAACCCCAATTGCCTTCTTCTTCCTTGCTGCATCAGACAGTCTTCTGGCACTGCAGACAGGCACTGCACTGATTGGATTGAGTTCTGGTTTTATATTTGCAGCTGCTGTGTCGGTTTCATCTGAGCTGTTTGGACCCAACAGTGTGGGCGTCAATCACAACATTCTCATAACAAATATCCCTATTGGATCTCTGCTCTATGGTTTTCTTGCTGCACTAGTTTATGATGCTAATGCAGACTCGACACCAGGAAACTTAATAATGTCTGACTCGGTCGTGTGTATGGGAAGGGGGTGCTACTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCATGGGACTAGGTTCAATAGCAGAAGCTTCACGTGTATATGGACAAATATGCATTGGGAGGTTGAGATTAGAGGAGCAGAGTTAA 1416 0.4393 MASRDCGAPYGGIESGCSICWFNTVCFVLCIRNFPVNRALALSLTVSFNGISAALYTLAANSIDPSSDSLYLLLNALVPLLICIAALVPILRQPALDPLPPDAVNRDSVIFLILNFLAILTGLYLLLFGSSASGVTSARLYFCGAILLLIFPLCIPGIVYARAWFRRTIHSSFRMESASFILVHDDDLEMHKELHSRQNSIVSNGDTYGLLSDNGHLFGSQKEKDSDLCCERVIGQDQLAVLGEEHPAAVIVRRLDFWLYYITYFCGGTIGLVYSNNLGQIAQSLGKSSNTSTLVTLYASFSFFGRLLSAAPDYIRNKLYFARTGWLSVALIPTPIAFFFLAASDSLLALQTGTALIGLSSGFIFAAAVSVSSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDANADSTPGNLIMSDSVVCMGRGCYFWTFVWWGCISVMGLGSIAEASRVYGQICIGRLRLEEQS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00120 471 Pfam Nodulin-like 16 156 IPR010658 -
Cca05g00120 471 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 449 - -
Cca05g00120 471 PANTHER NODULIN-LIKE/MFS TRANSPORTER 15 449 - -
Cca05g00120 471 SUPERFAMILY MFS general substrate transporter 38 448 IPR036259 -
Cca05g00120 471 Gene3D MFS general substrate transporter like domains 220 451 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00120 Cca-Chr5 2745495 2747896 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00120 15 449 Nodulin-like Gene Family AT1G31470 58.542 2.23e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00120 - - ccaj:109792663 850.892