Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00107 ATGAAGCCCCCCAATTCCATCTCcctcctcctcttcttcctcttcctcctcACACTCTCCATCACCAAAGCCCAAGCCCAAGCCCACCAGCCCAAAAAGACCTACATAATCCACATGGACAAGTCCAGCATGCCCGCGACCTTCACCGACCACCTCACCTGGTTCGACTCCTCCCTCAAATCCGCTTCCCCCTCCGCCGAAATCCTCTACACTTACAAACACGTGGCCCACGGCTTCTCCACCAGGCTCACCCCCCAAGAAGCCCACGCACTCTCCAACCACCCCGGAATCCTCTCCGTCACACCCGAACTCAAATACACTCTCCACACCACCCGAACCCCGCAATTCCTCGGTCTCGACAAATCCACCACACTCCTCCCCGCCTCCGACCAGCAGAGCCATGTAATCATCGGAATCCTCGACACCGGCGTCTGGCCGGAGCTCAAAAGCCTCAACGACGCCGCCTTCGGCCCCGTCCCCGCCACCTGGAAAGGCGAGTGCGAAACCGGCAACAACATGAACGCCTCCAGCTGCAATAAGAAGCTGATCGGAGCGAGATTCTTCTCCAAAGGCTACGAAGCCGCACTCGGACCTGTCGACTCAACCACCGAGTCAAACTCCGCCAGAGACGACGACGGCCACGGGACTCACACGCTGACCACCGCGGCAGGGTCGGCTGTGGCCAAAGCTAGCCTCTTCGGCTTGGCGTCAGGAACAGCCAGAGGCATGGCCCCGCAAGCGCGCGTGGCGGTTTACAAAGTGTGCTGGCTCGGCGGATGCTTCACCTCCGACATCGCCGCCGGGATCGACAAGGCCATCGAGGACGGCGTTAATGTTCTATCAATGTCGATCGGAGGAAGCTTGCTGGAATATTACAGAGACATAATCGCCATTGGTTCGTTCACCGCCATGTCACACGGGATTCTAGTGTCCACGTCAGCAGGCAACGGTGGGCCCAGTCAAGCCTCCTTGTCCAACGTGGCGCCCTGGATAACCACTGTGGGAGCCGGAACTATCGACCGTGATTTCCCCGCCCACATAACTCTCGGAACGGGCAAAACCTTCATCGGAGCTTCTCTTTACAGCGGCAAACCCTTGTCGGATTCGCCGCTTCCTCTTGTCTACGCCGGTAACGCCAGTAACTCCTCCGTCGGCTATCTTTGCTTGCAAGACTCTCTGATTACTGAGAAGGTTTCAGGGAAGATTGTTGTATGCGAGCGAGGTGGGAATCCGAGGGTGGAGAAGGGTTTGGTGGTTAAAAATGCGGGAGGTGCTGGAATGATTTTGGTTAACGGTGAAGCCTACGGAGAAGAGTTGGTTGCTGACCCTCATCTTCTCCCTGCTGCATCTTTAGGACAAAAATCGAGTGAAATTTTGAAGAAGTATGTTTTCTCATCAACTAATCCAACGGCCAAGATTCAATTCCTAGGGACGCATTTGGAGGTTCAGCCTTCGCCTGTTGTGGCGGCTTTTAGCTCCAGAGGACCCAATGCTCTTACTCCAAAGATTCTCAAACCGGATTTAATAGCTCCAGGGGTGAACATCTTAGCCGGTTGGACCGGTGCGGTTGGGCCAACCGGTTTAACCGTTGACCAACGACACGTCAGCTTCAACATAATTTCCGGCACTTCCATGTCGTGCCCGCACGTGAGTGTCTTGGCCGCGATTCTCAAGGGCGCGCACCCTCAGTGGAGCCCCGCCGCAATTAGGTCAGCGCTGATGACCACGGCGTACGTGAGTTACAAAAACGGCGAAACGATTCAGGATATCGCCAATGGACAAGCCGCGACGCCGTTTGATTACGGCGCGGGACACGTGGACCCCGTGGCTGCGCTTGATCCCGGTCTCGTCTACGATGCGAACGTGGATGAGTATCTGGGGTTCTTCTGCGCGCTGAACTACACGTCGCTTGAGATAAAGCTTGCCGCGAGGAGGGACTTCACGTGCGACCCGAAGAGGGAGTACCGAGTGGAGGATTTCAACTACCCGTCGTTTGCGGTTCCTTTCGAGACGGCTTCGGGGATTGGGGGCGGTTCGGATGCGGCGAAGACAGTGAAGTACTCTAGGGTGCTCACTAACGTGGGGTCCGCGGGGACTTATAAGGCTTCGGTGTTGTCCGGTTCTTCGAAGGTGAAGATTGTGGTGGAACCGCAGGAACTGAGTTTCGCGGAACTGTACGAGAAGAAGGGCTATACGGTGTCGTTTACCTCCACTTCGATGCCGTCTGGAACGACCAGCTTTGCACGTTTGGAATGGACGGACGGAAAGCATAGAGTTGGTAGTCCAATTGCGTTCAGCTGGACTTGA 2307 0.5553 MKPPNSISLLLFFLFLLTLSITKAQAQAHQPKKTYIIHMDKSSMPATFTDHLTWFDSSLKSASPSAEILYTYKHVAHGFSTRLTPQEAHALSNHPGILSVTPELKYTLHTTRTPQFLGLDKSTTLLPASDQQSHVIIGILDTGVWPELKSLNDAAFGPVPATWKGECETGNNMNASSCNKKLIGARFFSKGYEAALGPVDSTTESNSARDDDGHGTHTLTTAAGSAVAKASLFGLASGTARGMAPQARVAVYKVCWLGGCFTSDIAAGIDKAIEDGVNVLSMSIGGSLLEYYRDIIAIGSFTAMSHGILVSTSAGNGGPSQASLSNVAPWITTVGAGTIDRDFPAHITLGTGKTFIGASLYSGKPLSDSPLPLVYAGNASNSSVGYLCLQDSLITEKVSGKIVVCERGGNPRVEKGLVVKNAGGAGMILVNGEAYGEELVADPHLLPAASLGQKSSEILKKYVFSSTNPTAKIQFLGTHLEVQPSPVVAAFSSRGPNALTPKILKPDLIAPGVNILAGWTGAVGPTGLTVDQRHVSFNIISGTSMSCPHVSVLAAILKGAHPQWSPAAIRSALMTTAYVSYKNGETIQDIANGQAATPFDYGAGHVDPVAALDPGLVYDANVDEYLGFFCALNYTSLEIKLAARRDFTCDPKREYRVEDFNYPSFAVPFETASGIGGGSDAAKTVKYSRVLTNVGSAGTYKASVLSGSSKVKIVVEPQELSFAELYEKKGYTVSFTSTSMPSGTTSFARLEWTDGKHRVGSPIAFSWT 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00107 768 Pfam PA domain 372 457 IPR003137 -
Cca05g00107 768 Pfam Subtilase family 133 604 IPR000209 GO:0006508|GO:0008236
Cca05g00107 768 ProSiteProfiles Serine proteases, subtilase domain profile. 105 612 - -
Cca05g00107 768 Gene3D Peptidase S8/S53 domain 135 625 IPR036852 GO:0004252|GO:0006508
Cca05g00107 768 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Cca05g00107 768 SUPERFAMILY PA domain 366 434 IPR046450 -
Cca05g00107 768 Pfam Fibronectin type-III domain 659 764 IPR041469 -
Cca05g00107 768 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 22 766 - -
Cca05g00107 768 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Cca05g00107 768 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Cca05g00107 768 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Cca05g00107 768 Gene3D - 629 767 - -
Cca05g00107 768 SUPERFAMILY Subtilisin-like 108 616 IPR036852 GO:0004252|GO:0006508
Cca05g00107 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 109 IPR037045 -
Cca05g00107 768 Gene3D - 340 480 - -
Cca05g00107 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 766 IPR045051 -
Cca05g00107 768 CDD Peptidases_S8_3 106 578 IPR034197 -
Cca05g00107 768 CDD PA_subtilisin_like 347 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00107 Cca-Chr5 2566005 2568905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00107 13 768 Subtilisin-like Serine Gene Family AT5G67360 62.797 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00107 - - gmx:100793808 1314.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00107 05 2566005 2568905 Cca05g00107 05 2566005 2568905 ECH