Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00095 ATGGGTTACTTCCATTTGTTGTCCAACCTTCAATTTCAAGTCTTGTGGTCTTATTTGTTTATTTTAATTTTTGGCATTACCTTTCTCAAAGGCTTTGCATCACACTTGTTTATCAAAACTAAGAAACAGAAACAACCCTTGCCTCCCGGTCCCAAACCATGGCCTATAATCGGTAACCTTCCAGAGATGCTTACCAATAGACCTACATTTCGGTGGATACATAAACTAATGAAGGAAATGAACACTGAAATTGCATGTATCCGCCTAGGAAATGTCCATGTCATTCCCGTTACTTGCCCAACCATCGCTTGTGAATTCTTGAAAAAACAAGATGCAATTTTTGCTTCTAGGCCCACAAGCATAACCACTTCTCTTATTAGTCGTGAATATCTCACCACAACCATGGTGCCCTTTGGAGAACAATGGAGGAAAATGAGGAAAATCATTGGGAATGATTTGTTGTCAACCACCACCCACCAACGACTTGAAAATAAGAGGGTTGAAGAAGCTGACAACCTTGTGTTTTACATCTACAACATGTGTAAAAGCAATGTCAATGGTAATTTTGGCCTTATTAATGTGAGAGATGTTACACAACACTATTGTTGCAATGTGATCAAGAAATTGAGCTTTAGTATGAGGTACTTTGGGGAAGGTAAGAAGGATGGAGGGCCAGGTTATGAGGAAAAGGAACATCTTGATGCTATTTTCACAATGCTCAAGTACATTTATAACTTTAGGGTTTCTGACTATGTCCCTTGCTTGAGGGTACTTGACTTGGATGGTCACAAAGGCAAGGTGGAAAAGGCCATAAAAATCGTGAACAAGTATCAAGACCCTATTATTGAGCAACGACTCAAAGAATGGAACAATGGGTCCAAGATTGACAAAGAAGATTACTTGGATATTCTCATCTCACTCAAAGACGTTAACAATAAACCGCTATTGACAATCGGAGAAATTCAGGCACAAATCACAGAGTTGATTATGGCGGCAGTGGATAACCCATCAAATGCAGTTGAGTGGGGCCTTGCAGAGATGATAAACCAACCAGAGTTGCTTCAACGTGCCACAGAAGAATTAGACACAGTTGTAGGAAAAAAAAGGCTTGTCCAAGAATCAGACATCCCAAAGCTCAACTACATAAAAGCATGTGCAAGAGAATGTTTTCGCCTTCACCCAATTGTGCCTTTCAATGTTCCCCATGTCTCTATGCAAGACACAATAGTGGGTAACTACCTAATCCCAAAAGGTAGCCACATTCTCTTAAGTAGACAAGAGCTTGGGCGAAACTCAAAATTTTGGAGTGATGAGCCCAACAAATTCAAGCCAGAACGCCACCTTAAGAATGAGGTGGTTTTGACAGAACCAGATTTGAATTTCATATCGTTTAGCACTGGACGACGTGGTTGTCCAGGATTCATGCTTGGCACCACAATGACTGTGATGTTATTTGCTAGGTTGCTTCATGCCTTCACTTGGACTACACCACCTAATGTGTCACACATCAACCTTGCTGAGTCCAATGATGATATATTTCTCGCTCATCCACTTGTATTAATAGCAAAGCCAAGATTAGCACCAGAGCTTTACACCAAATGA 1602 0.4064 MGYFHLLSNLQFQVLWSYLFILIFGITFLKGFASHLFIKTKKQKQPLPPGPKPWPIIGNLPEMLTNRPTFRWIHKLMKEMNTEIACIRLGNVHVIPVTCPTIACEFLKKQDAIFASRPTSITTSLISREYLTTTMVPFGEQWRKMRKIIGNDLLSTTTHQRLENKRVEEADNLVFYIYNMCKSNVNGNFGLINVRDVTQHYCCNVIKKLSFSMRYFGEGKKDGGPGYEEKEHLDAIFTMLKYIYNFRVSDYVPCLRVLDLDGHKGKVEKAIKIVNKYQDPIIEQRLKEWNNGSKIDKEDYLDILISLKDVNNKPLLTIGEIQAQITELIMAAVDNPSNAVEWGLAEMINQPELLQRATEELDTVVGKKRLVQESDIPKLNYIKACARECFRLHPIVPFNVPHVSMQDTIVGNYLIPKGSHILLSRQELGRNSKFWSDEPNKFKPERHLKNEVVLTEPDLNFISFSTGRRGCPGFMLGTTMTVMLFARLLHAFTWTTPPNVSHINLAESNDDIFLAHPLVLIAKPRLAPELYTK 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00095 533 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 Pfam Cytochrome P450 48 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 531 - -
Cca05g00095 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Cca05g00095 533 SUPERFAMILY Cytochrome P450 48 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 Gene3D Cytochrome P450 39 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00095 533 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 12 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00095 Cca-Chr5 2163413 2165324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00095 21 531 Cytochrome P450 AT5G05260 52.621 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00095 - K14984 gmx:100786887 856.284