Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00035 ATGGCCAAGATGTTGTTGAACCTCTTGTTCATGATTGGAGCAATGTTGTTTGGTGTTGGAGCTGAGCCAGTGGAAGATAAACTAGCATTGCTTGATTTCCTTCACAACATTAACCACTCTCATAATCTCAACTGGGATAACAGATCTTCTGTGTGCAACAGGTGGATAGGAGTGACCTGCAACACTGACAAATCACGAGTTATAGCACTCCAACTAACTAGTACCGGTTTGAGTGGTCCAATTCCACCTAACACTCTTAGCCTTCTCTCACAACTCCAAACTCTGAGTCTTGCATCAAATAGCATAACCGGTTCTTTCCCTTCGGGTTTCTCTCAGCTAAGGAATTTGATCCATCTGTATCTCCAATCCAACAATTTTTCAGGTCCATTGCCATCAGACTTTTCACTTTGGAAAAATCTTAGCATTGTCAATTTATCCAACAATTCCTTCAATAGGAGCATACCCTTTTCACTTTCCAATTTGACTCATCTCACATCTTTAGTCCTAGCCAACAACTCTCTCTCAGGTGAAATTCCTGATCTCAATATCCCCACCCTTCTAGAGCTGAATTTTGCAAACAATAACCTTAGTGGGGTTGTGCCTAAATCCCTTGAGACATTCCCAATTAGATCTTTTTCTGGCAACAATGTTACATATTCGTATGCACTTCCTCCGTCTCTTCATGTTCAACCCCCAAATCCTCATCCCACAAGGAGAAAATCCAAAGGGCTTAGGGAACCAGCATTGTTAGGTATCATCATTGGTTGTTGTGTGCTGGCACTTGCAGTCGTAGCAGCTTTTGTGATTGTTTGCTGCTATGAGAAAAAAGGTGGTGAAGAAGGACATCAAGTGAAGAAGTACAAAAGAGAAGTGTCTAGGAAGAAAGAAGTTTCTGAAAGTAGAGACAAGAACAAAATTGTTTTCTTTGAGGGTTGCAATCTTGCATTTGACTTGGAAGACTTGTTGAGAGCTTCTGCTGAGGTGCTTGGAAAGGGCACGTTTGGGACAGTGTATAAGGCTGCTCTAGAAGATGCAACAACCGTGGCAGTGAAGAGGTTGAAGGATGTCACGGTTGGAAAACGCGAGTTTGAACAGCAGATGGAGATGGTTGGGAGGATTAGGCACGACAATGTGGCTGCACTAAGAGCATATTACTATTCAAAGGAGGAGAAACTTATGGTGTATGATTACTACGAACAGGGCAGTGTCTCTTCAATCTTGCATGGCAAAAGAGGGGGAGGTAGAATTTCTCTAGACTGGGATAGCCGATTGAAAATAGCAATTGGTGTAGCAAGAGGCATTGCTCACATCCATGCTCAACATGGAGGGAAACTAACACATGGAAACATTAAGGCCTCAAACATCTTCCTCAACTCCCGAGGCTATGGTTGTCTATCAGACATTGGTCTTGCAACATTGATGAATCCATCACTGAGGGCAACAGGGTACCGTGCAGTGGAAGTAACCGACACGCGAAAGGCGGCGCCGGCGGCCGACGTGTACAGTTTTGGGGTCCTGCTGCTAGAGCTTCTAACAGGGAGGTCTCCCTTGCATGCCAAGGGAGGTGAGGAAGTTGTGCACTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTGGAGTTACTGAGGTATCCAAATATTGAAGAAGAAATGGTGGAGATGTTACAAATAGGAATGGCATGTGTTGTGAGGACACCAGATCAGAGACCAAAGATTGGTGAGGTGGTGAGAATGGTGGAGGAAATTCGTAGAGTAAACACTGAGAATAGATTATCCACTGAATCTAGATCAGAATGTTCCACTCCAACCCCTCGTGTTATTGAGACACCTTCAACTTCAGTATCTTTTGCACATTAA 1881 0.4391 MAKMLLNLLFMIGAMLFGVGAEPVEDKLALLDFLHNINHSHNLNWDNRSSVCNRWIGVTCNTDKSRVIALQLTSTGLSGPIPPNTLSLLSQLQTLSLASNSITGSFPSGFSQLRNLIHLYLQSNNFSGPLPSDFSLWKNLSIVNLSNNSFNRSIPFSLSNLTHLTSLVLANNSLSGEIPDLNIPTLLELNFANNNLSGVVPKSLETFPIRSFSGNNVTYSYALPPSLHVQPPNPHPTRRKSKGLREPALLGIIIGCCVLALAVVAAFVIVCCYEKKGGEEGHQVKKYKREVSRKKEVSESRDKNKIVFFEGCNLAFDLEDLLRASAEVLGKGTFGTVYKAALEDATTVAVKRLKDVTVGKREFEQQMEMVGRIRHDNVAALRAYYYSKEEKLMVYDYYEQGSVSSILHGKRGGGRISLDWDSRLKIAIGVARGIAHIHAQHGGKLTHGNIKASNIFLNSRGYGCLSDIGLATLMNPSLRATGYRAVEVTDTRKAAPAADVYSFGVLLLELLTGRSPLHAKGGEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACVVRTPDQRPKIGEVVRMVEEIRRVNTENRLSTESRSECSTPTPRVIETPSTSVSFAH 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00035 626 Gene3D Transferase(Phosphotransferase) domain 1 398 610 - -
Cca05g00035 626 PANTHER OS05G0588300 PROTEIN 10 616 - -
Cca05g00035 626 SUPERFAMILY L domain-like 33 211 - -
Cca05g00035 626 PANTHER LRR RECEPTOR-LIKE KINASE 10 616 - -
Cca05g00035 626 MobiDBLite consensus disorder prediction 600 626 - -
Cca05g00035 626 ProSiteProfiles Protein kinase domain profile. 323 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00035 626 SUPERFAMILY Protein kinase-like (PK-like) 327 588 IPR011009 -
Cca05g00035 626 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Cca05g00035 626 Pfam Leucine rich repeat 81 126 IPR001611 GO:0005515
Cca05g00035 626 Pfam Protein kinase domain 326 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00035 626 MobiDBLite consensus disorder prediction 597 626 - -
Cca05g00035 626 Gene3D Phosphorylase Kinase; domain 1 287 397 - -
Cca05g00035 626 ProSitePatterns Protein kinases ATP-binding region signature. 329 360 IPR017441 GO:0005524
Cca05g00035 626 Gene3D Ribonuclease Inhibitor 24 230 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00035 Cca-Chr5 880655 884753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00035 15 615 Receptor kinase-like Gene Family AT4G23740 55.024 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca05g00035 Pkinase 3.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00035 - - gmx:100810095 1038.48