Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00031 ATGGCGTTGGAAGTGCTGGAAGCACTTGACTCAGCACGCACGCAATGGTACCACGTGACGGCGATAGTGATCGCAGGCATGGGCTTCTTCACCGACGCCTACGACCTTTTCTGCATCTCAGCAGTTTCCAAGCTATTGGGTCGCTTGTACTACTTCGACCCCAGCACCGGAAAACCGGGGAAGCTCCCAACCAACGTGAACAACTTCGTCACCGGTGTGGCCCTCGTCGGAACCCTAACCGGGCAACTCGTGTTCGGGTGGCTCGGCGACAAGCTGGGGCGGAAGAAGGTGTACGGCATAACGCTGATCCTGATGGTCCTCTGCGCCATCTGCTCCGGCCTCTCCTTCGGCGCCACCGCGAAGTCCGTCATGGGGACCCTCTGCTTcttccgcttctggctgggcttcggcatcggcGGCGACTACCCGCTCTCCGCCACCATCATGTCGGAGTACGCCAATAAAAGGACACGTGGCGCGTTCATAGCCGCGGTGTTCGCCATGCAGGGCGTGGGAATCATCTTCGCGGGGTTGGTCTCCATGATATTCTCGGCGATCTTCAAATATTACTACTCCGCTCCGACCTTCAACGAAAACCACGTTTTGTCGACGCGACCGGAGGGTGACCTGCTGTGGCGGTTGGTCCTCATGGTTGGCGCCATTCCCGCCATGATGACCTACTACTGGCGGATGAAGATGCCCGAAACGGGGCGTTTCACTGCCATCATCGAGGGAAACGCCAAGCAAGCCGCGGCGGACATGGCTAGGGTTTTGGACATTGAAATCCAAGCGGAGCAGGATAAGCTCGCGGACTTCAACGCAGCGAATAACTACCCTCTCTTGTCCAACGAGTTCTTTCAGCGCCACGGTCGTCACTTGATTGGCACCATGAGCTCGTGGTTCCTTCTGGACATCGCCTTCTACAGCCAGAACCTCACGCAGAAGGATATCTTCCCCGCCATTGGTCTCATCGCTCACGAGGTTGACATGAGCGCCATTGACGAGGTTTTCCAGACGTCACGTGCCATGTTCGTGATCGCCTTGCTGGGGACGTTCCCGGGATACTGGTTCACCGTCTTCTTCATCGAGAAGATCGGGCGCTACAAGATCCAGTTGGTGGGGTTCTTCATGATGTCGTTCTTCATGTTCGTGATTGGGGTGAAGTACGAATACTTGAAGAACGAGAACAAGAACATGTTCGCGCTCTTGTACGGGTTGACGTTCTTCTTCGCCAACTTCGGGCCCAACAGCACGACCTTCGTGCTGCCGGCGGAGCTGTTTCCGACGCGCGTGAGGAGCACGTGCCATGCGCTGAGCGCCGCCGCGGGGAAGGCCGGGGCGCTGGTGGGGACGTTTGGGATTCAGAGCTTGACGGTGGGAGGGGACTTGTACAAGATTCGGAGGGCCATGATCATTCTGGCGTTCACCAACTTGTTGGGCTTTTGTTGCTCTTTCTTGGTTACTGAGACTAAGGGAAGGTCTCTCGAGGAGATTTCCGGGGAGGATGGGAGAGAGAGTGAGCTCACGGCAACGCCCAATGATAGGGTTCAGGGATCCAGGACCGAGACCATGTGA 1575 0.5594 MALEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISAVSKLLGRLYYFDPSTGKPGKLPTNVNNFVTGVALVGTLTGQLVFGWLGDKLGRKKVYGITLILMVLCAICSGLSFGATAKSVMGTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMIFSAIFKYYYSAPTFNENHVLSTRPEGDLLWRLVLMVGAIPAMMTYYWRMKMPETGRFTAIIEGNAKQAAADMARVLDIEIQAEQDKLADFNAANNYPLLSNEFFQRHGRHLIGTMSSWFLLDIAFYSQNLTQKDIFPAIGLIAHEVDMSAIDEVFQTSRAMFVIALLGTFPGYWFTVFFIEKIGRYKIQLVGFFMMSFFMFVIGVKYEYLKNENKNMFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGALVGTFGIQSLTVGGDLYKIRRAMIILAFTNLLGFCCSFLVTETKGRSLEEISGEDGRESELTATPNDRVQGSRTETM 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00031 524 MobiDBLite consensus disorder prediction 496 524 - -
Cca05g00031 524 Gene3D MFS general substrate transporter like domains 17 515 IPR036259 -
Cca05g00031 524 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 492 IPR020846 GO:0022857
Cca05g00031 524 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 2 509 - -
Cca05g00031 524 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 509 - -
Cca05g00031 524 CDD MFS_PhT 22 491 - -
Cca05g00031 524 MobiDBLite consensus disorder prediction 510 524 - -
Cca05g00031 524 SUPERFAMILY MFS general substrate transporter 8 499 IPR036259 -
Cca05g00031 524 TIGRFAM 2A0109: phosphate:H+ symporter 6 501 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cca05g00031 524 Pfam Sugar (and other) transporter 22 499 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00031 Cca-Chr5 711464 713386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00031 3 501 Inorganic Solute Cotransporters AT5G43350 62.035 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00031 K08176 - gmx:100805284 931.784