Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g00027 | ATGGGAGATTGGGATTGTAGCAACCTCATTCATGTGCTACAACAAGGCATGGAAGTGGCAAAGCAACTCCAAATCTCTCTCCACGCGCCTTATTCGTCGCAAGAAAGCCACGAGCTTCTAATCGAGAAGATCATAGACGCATTTGAAAAGGCTCTTAAAATGGTGAACTTGAAGATGGGGTTAGTGGGTCGTCCTTCTTCACAAATGTTGCACTCAAGGGTTGCAATTCGAACTTCACAATCACCACCTTTGAGCGGAAGTCCTCGCAATGGAAACTCAGACAAAGATCTGAGGGAAATCAACCGTAGTTCCCCCAACGAAAGGAGGACTAAACCAAGTTGGACAAAACAGATTCGAGTTACCCCGGGGATGGGAGTGGAAGGGTCTCTTGATGATGGATATACTTGGAGAAAATATGGCCAGAAAAGCATACATGGAGCTAAGTATCCAAGAGGCTATTATAGATGTGCCCAAAGAAATTTTGAAGGTTGCATGGCCACAAAGCAAGTGCAAAGATCCGATCAAGACCCAACAGTGTTTGAAATCCATTACCGGGGAAACCACACATGCACAATGGCTTCCTTTGCAGTTCCAACATTAGGGATCCCAGAAAATCAAGAACCAAATTTTACTACAATTCCACAGCAGCAACCAAGTGATGCTATGAATCTCCATTTACGGCTAGGAGTCCTAACGGAGAACCTAGATCAATCGTTTGCCTCATCATTCCACCAACTTTTGACTTCAACTATAAAAAAGGAAGAGCAAGTTTTCCCTTCCCCAATCATTGAAAACAACTATGCTCAAAATTTCAATTGCCCTTCTTATGTGTCCCCATCTGACACAACTTATTTTTCGGTTGACAACTTTAGAGGGCACCCTTTGGCAAGTTCTGGAAGTGAGGTCAATGACATGATTTCAGCGGTTACATCAGCTGCTAACTCTCCAACACTTGCAAGCTTAAACTTCCCATTTGATCAGTTTCATATATTAGACGGCCAAAACTTTACCTTTGATAACTCACCATTCTCCTAA | 1035 | 0.4309 | MGDWDCSNLIHVLQQGMEVAKQLQISLHAPYSSQESHELLIEKIIDAFEKALKMVNLKMGLVGRPSSQMLHSRVAIRTSQSPPLSGSPRNGNSDKDLREINRSSPNERRTKPSWTKQIRVTPGMGVEGSLDDGYTWRKYGQKSIHGAKYPRGYYRCAQRNFEGCMATKQVQRSDQDPTVFEIHYRGNHTCTMASFAVPTLGIPENQEPNFTTIPQQQPSDAMNLHLRLGVLTENLDQSFASSFHQLLTSTIKKEEQVFPSPIIENNYAQNFNCPSYVSPSDTTYFSVDNFRGHPLASSGSEVNDMISAVTSAANSPTLASLNFPFDQFHILDGQNFTFDNSPFS | 344 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g00027 | 344 | Gene3D | WRKY domain | 124 | 193 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca05g00027 | 344 | MobiDBLite | consensus disorder prediction | 76 | 91 | - | - | |
Cca05g00027 | 344 | SUPERFAMILY | WRKY DNA-binding domain | 129 | 192 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca05g00027 | 344 | SMART | WRKY_cls | 130 | 192 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca05g00027 | 344 | Pfam | WRKY DNA -binding domain | 131 | 190 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca05g00027 | 344 | MobiDBLite | consensus disorder prediction | 76 | 116 | - | - | |
Cca05g00027 | 344 | MobiDBLite | consensus disorder prediction | 92 | 106 | - | - | |
Cca05g00027 | 344 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED | 1 | 341 | - | - | |
Cca05g00027 | 344 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 1 | 341 | IPR044810 | GO:0003700 | |
Cca05g00027 | 344 | ProSiteProfiles | WRKY domain profile. | 125 | 193 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g00027 | Cca-Chr5 | 606052 | 608251 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca05g00027 | 1 | 236 | WRKY Transcription Factor Family | AT4G23810 | 34.615 | 1.07e-42 | 149 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Cca05g00027 | WRKY | 4.4e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca05g00027 | - | - | ccaj:109795434 | 704.901 |