Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01975 ATGGCCATGGTCATGCCTCTGTTTCTGATCTTCCTTCTGCACATAACCTCGGCGACATCACCAGATCTCCGACCTGGGTTCTACTCGAAAACATGTCCACAATCCGAAATCATAGTCCGAGATGTCATGAAGAAGGCCCTTGCGAGGGAAGCCAGAAGTGTTGCCTCTGTCATGCGCCTCCAGTTCCACGATTGCTTCGTCAACGGGTGTGATGGTTCTGTGTTGCTGGATGACACGCCAACCATGCTTGGGGAGAAACTGTCACTCTCAAACATAAATTCGCTCAGATCATTTGAAGTTGTTGATCAAGTGAAGGAAGCGCTCGAGAAGGCGTGTCCGGGAGTTGTTTCCTGCGCTGACATCATCATTATGGCATCCAGAGATGCTGTGGCTCTGACAGGTGGACCCGACTGGGAGGTGAGGTTGGGAAGATTGGACAGCTTGAGTGCTAGTCAAGAAGATTCAGACGATATCATGCCGAGTCCAAGAGCCAATGCAAGCTATCTTATTGATCTCTTCCAGAAATTTAACCTTACTGTGAAAGACCTAGTAGCACTCTCAGGATCTCACTCTATTGGCCAAGGTCGTTGTTTTTCCATCATGTTTAGGCTATACAATCAATCTGGAACTGGAAGACCTGACCCTGCCATTGACCCTACCTATAGAGAAGAGCTTAACAGGCTATGTCCACTGGACGTTGACCAAAACGTGACAGGGAACCTTGATTCCACGCCTGTGGTCTTTGATAACCAATATTTCAAGGACTTGGTTGCTGGGAGAGGATTTCTTAACTCTGATCAAACCCTTTTCACATTCCCCCAGACAAGGGAGTTTGTGAGGTTGTTTAGTAAACATCAAAATGAGTTTTTCAAAGCATTTGCGGAAGGAATGGTGAAAATGGGTGACTTGCAGTCTGGTCGGCCTGGGGAAGTGAGGACAAATTGCAGGGTCGTCAATGCTCGCCCGGTTCATTTGCTGCTTGAATATCCAGACAAGATGGAGAATAATGTTGAATATATGTAA 1023 0.4702 MAMVMPLFLIFLLHITSATSPDLRPGFYSKTCPQSEIIVRDVMKKALAREARSVASVMRLQFHDCFVNGCDGSVLLDDTPTMLGEKLSLSNINSLRSFEVVDQVKEALEKACPGVVSCADIIIMASRDAVALTGGPDWEVRLGRLDSLSASQEDSDDIMPSPRANASYLIDLFQKFNLTVKDLVALSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIDPTYREELNRLCPLDVDQNVTGNLDSTPVVFDNQYFKDLVAGRGFLNSDQTLFTFPQTREFVRLFSKHQNEFFKAFAEGMVKMGDLQSGRPGEVRTNCRVVNARPVHLLLEYPDKMENNVEYM 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01975 340 Gene3D Peroxidase, domain 2 160 300 - -
Cca04g01975 340 PANTHER PEROXIDASE 72-RELATED 6 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PANTHER PEROXIDASE 17 6 321 - -
Cca04g01975 340 Gene3D - 26 319 - -
Cca04g01975 340 SUPERFAMILY Heme-dependent peroxidases 22 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Cca04g01975 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cca04g01975 340 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
Cca04g01975 340 Pfam Peroxidase 39 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca04g01975 340 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01975 Cca-Chr4 38518655 38525568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01975 1 327 Peroxidase AT2G22420 74.924 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01975 K00430 - gmx:100796737 587.415