Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01965 ATGACAATGCTTAAAGTAGTATCAGAAAATGGTGATAATTTATGTTCAAGTGATCTACCACTAGAAGTGGAAGCTGCTAAACAAACGTCTTCATTGTCTGAACTGTATTCATCAATAGCAACGTTGTTCAAAACAAGTTGGGCTCTTAAACGAATGGTGGGAGTTATGGTGGTTGGTTTTGGCATTGGAATAGTGTATTATGGCACGCCACTAGCAGTGGGAAACTTGGACTGTAACATATACCTGGCCGTTGTGTATAACGCCTTGATGGAAATACTCTCTTGCGTAGTGACCTATTTCTTGGGAAATTTCAAGAGAAAGTTATCCATTTTTGCGCTCTCACTAGGAAGTGGGGTGTGTTGCATAATGTGTGTTGTTGTGGCACCTGTTAAGGTGTGGTTAGCGGTGGCATCGTTTTTCTGTGTTTGCATGGCTCGCAACGTGTTTTTTATATACATCGTAGAGCTGTTTCTGACCCGTGTGAGGAACACTGCAATGTCGCTAGCGAGACAGGCTATGGTGTTTGGTTGCATATTCAGCCCATTTCTGATATCTGCGGGGAGGAAGAACCACGTTTTCTCTTATGACGTGTTTGGAGACGTTATAATTTGTTCCACTTTTGTGTTGTTCTGTTTGCCTGAGACAATAGGAATGGCTCTTTCTGATACCATGGATCAACAGAAAAACAAGGAAACCCCGGCCCAAGTTGAGAAGGAAACTAGGGTTTTGGGGGATTTAAAACAATCCTCTCGCCCCCAACTCCTCCTCTACGGCATTCATCTTCGTTCTTCGTTTTCTCAGGTTTACGGATCTTTTTGA 819 0.4286 MTMLKVVSENGDNLCSSDLPLEVEAAKQTSSLSELYSSIATLFKTSWALKRMVGVMVVGFGIGIVYYGTPLAVGNLDCNIYLAVVYNALMEILSCVVTYFLGNFKRKLSIFALSLGSGVCCIMCVVVAPVKVWLAVASFFCVCMARNVFFIYIVELFLTRVRNTAMSLARQAMVFGCIFSPFLISAGRKNHVFSYDVFGDVIICSTFVLFCLPETIGMALSDTMDQQKNKETPAQVEKETRVLGDLKQSSRPQLLLYGIHLRSSFSQVYGSF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01965 272 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 1 231 - -
Cca04g01965 272 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 231 - -
Cca04g01965 272 SUPERFAMILY MFS general substrate transporter 32 217 IPR036259 -
Cca04g01965 272 Gene3D MFS general substrate transporter like domains 5 230 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01965 Cca-Chr4 38260642 38264931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01965 1 230 Organic Solute Cotransporters AT1G16390 40.254 1.36e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01965 - - ccaj:109788724 443.351