Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01955 ATGACCAAGGCCATGACAACTCGTTATTTGCTTCAAAGTTCTTTCAAGGTTGAACCTGGTCACACAATTCTTGTACATGCAGCAGCTGGTGGAGTAGGATCCTTATTATGCCAGTGGGCAAATACTATTGGTGCAACTGTTATCGGAACTGTATCCAATAAAGTGAAGGCAGCTCAGGCAAAGGAGGATGGATGCCATCATGTCATAATTTATACAGAAGAAGATTTTGTTGCTCGTGTCAACGAAATTACTTCAGGCAATGGAGTTGAAGTAGTCTATGATTCTGTGGGAAAAGACACCTTCGAGGGATCTCTGGCTTGCTTGAAGTTTCGAGGTTACATGGTATGTTTTGGACAGTCATCGGGTACACCTGATCCAATTTCATTATCTTCCTTAGCTACCAAGTCCTTGTTCTTGACAAGGCCCACTCTAAAGCATTATAATGTCACCCGAGATGATCTATTGGAGGCTGCTGGAGAGGTGTTTGCCAAGGTTGCTTCTGGTGTCTTAAAGGTGCGAGTTAATCATATTTATCCATTGAGTGAGGCAGCCAAAGCACACGAAGACATGGAAAATCGGAAGACCACTGGATCTATTGTCTTGTTACCATGA 612 0.4314 MTKAMTTRYLLQSSFKVEPGHTILVHAAAGGVGSLLCQWANTIGATVIGTVSNKVKAAQAKEDGCHHVIIYTEEDFVARVNEITSGNGVEVVYDSVGKDTFEGSLACLKFRGYMVCFGQSSGTPDPISLSSLATKSLFLTRPTLKHYNVTRDDLLEAAGEVFAKVASGVLKVRVNHIYPLSEAAKAHEDMENRKTTGSIVLLP 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01955 203 CDD QOR2 1 203 - -
Cca04g01955 203 Pfam Zinc-binding dehydrogenase 31 138 IPR013149 -
Cca04g01955 203 SMART PKS_ER_names_mod 4 201 IPR020843 GO:0016491
Cca04g01955 203 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 152 IPR036291 -
Cca04g01955 203 PANTHER QUINONE OXIDOREDUCTASE PIG3-RELATED 1 202 - -
Cca04g01955 203 PANTHER ALCOHOL DEHYDROGENASE SUPERFAMILY, ZINC-TYPE-RELATED 1 202 - -
Cca04g01955 203 Gene3D - 2 197 - -
Cca04g01955 203 Gene3D - 3 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01955 Cca-Chr4 37987079 37991848 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01955 K00344 - gmx:100793768 350.132