Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01948 ATGGAGGCTGGTTGTGTCACTGGCAATAGGACTAATGGCCTTGCTGATGGTCTATCTGGGGAGTGGTTCAGTGTGTTTGATCTTTTGACTCCTGCTTCGAGGAAAGGGCTTCCTGTAACTCTAGTCATATGCAGAATGACACTGCAAGATATATTAGTGAAAGCAGTTGGTTCCAACATACTTAGAAACAAATCTAAAGTTGTGGATTTTATTCAAGAACCTAGCAAGGTTAGAGTGATCCTGGAAAATGGAGACCACCATGATGGTGATATTTTAATAGGGGCAGATGGAATATGGTCAGAAGTGCGATCAAAACTCTTCGGGTGGCAGGAAGCAAAGTACTCAGGTTTCACATGCTACAGTGGATTAACAAACTATATGCCCCCATATATTGATACTATAGGGTATAGGGTGTTCTTGGGGTTGAACCAGTACTTTGTTGCTTCAGATGTTGGCCATGGGAAGATGCAATGGTATGCTTTCCATGGTGAACCCCCTTCAAGTGACCCTTTCCCTGAAGCAGGTAAGAAGAAGAGGCTTTTGGATCTCTTTGGTAACTGGTGCAATGAAGTGATTGCACTCATATCAGAAACACCCGAGCATATGATTCTGCAGAGGGATATATATGACAGGGACATGATCAACACTTGGGGAATTGGGAGAGTGACTTTGTTAGGTGATGCAGCACATCCAATGCAACCAAATCTTGGTCAGGGGGGTTGTATGGCAATAGAGGATTGTTACCAACTGATACTTGAGCTTGACAAAGTTACTAAACATGGGTCTGACGAGTCTGAAGTTATCTCAGCCCTTAGAAGATATGAGAAGAAAAGAATTCCACGAGTTACGGTGTTACATACAGCTAGCAGGATGGCATCAAAAGTGCTAGTAAACTACCGACCTTATATTGACCTTAAATTTTGGCCACTATCGAAGGTAGCAAATATGCAGATAAAGCACCCTGGCATTCATGTAGCTCAAGCGTTTTTCAAGTTCACTTTTCCACAATTTGTTACTTGGATGATTGCTGGCCATGGGTTGTGGTGA 1047 0.4288 MEAGCVTGNRTNGLADGLSGEWFSVFDLLTPASRKGLPVTLVICRMTLQDILVKAVGSNILRNKSKVVDFIQEPSKVRVILENGDHHDGDILIGADGIWSEVRSKLFGWQEAKYSGFTCYSGLTNYMPPYIDTIGYRVFLGLNQYFVASDVGHGKMQWYAFHGEPPSSDPFPEAGKKKRLLDLFGNWCNEVIALISETPEHMILQRDIYDRDMINTWGIGRVTLLGDAAHPMQPNLGQGGCMAIEDCYQLILELDKVTKHGSDESEVISALRRYEKKRIPRVTVLHTASRMASKVLVNYRPYIDLKFWPLSKVANMQIKHPGIHVAQAFFKFTFPQFVTWMIAGHGLW 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01948 348 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 88 103 - -
Cca04g01948 348 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 234 250 - -
Cca04g01948 348 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 219 234 - -
Cca04g01948 348 SUPERFAMILY FAD/NAD(P)-binding domain 25 304 IPR036188 -
Cca04g01948 348 Pfam FAD binding domain 213 283 IPR002938 GO:0071949
Cca04g01948 348 Gene3D - 2 306 IPR036188 -
Cca04g01948 348 PANTHER ZEAXANTHIN EPOXIDASE, CHLOROPLASTIC-LIKE ISOFORM X1 1 347 - -
Cca04g01948 348 PANTHER - 1 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01948 Cca-Chr4 37876801 37885835 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01948 61 246 Miscellaneous Gene Families AT4G38540 26.289 2.95e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01948 K09838 - gmx:100778602 668.307