Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01944 ATGGCGCGTGGAGAAGTAGGAGTGCTGAGCGCGCTTGATGCAGCGAAGACGCAATGGTATCACTTCACAGCGATAGTGATAGCGGGCATGGGGTTCTTCACGGACGCCTACGACCTCTTCAGCATCCCCAACGTGACGAAGCTTCTAGGGCGCATCTACTACACCCACCCGGGGGCCCCCAAGCCAGGGACGCTGCCTCCCAACGTCTCCGCCGCCGTCAACGGGGTCGCCCTCTGCGGGACGCTCGCCGGCCAGCTCTTCTTCGGCTGGCTGGGGGACAAGATGGGCCGGAAGAAGGTCTACGGACTCACGCTTGCCCTCATGGTCTTCTCCTCCCTCGCCTCCGGCCTCTCCTTCGGCCACTCCGCCAAGGGCGTCATCGCCACCCTCTGCTTcttccgcttctggctcggcttcggtatcggcGGCGACTACCCTCTCTCCGCCACCATCATGTCTGAGTACGCCAACAAGAAGACGCGTGGCGCCTTCATTGCCTCCGTCTTTGCCATGCAAGGATTTGGAATCCTGGCGGGAGCTGTGGTTTCGATCGTAGTGGCGACAGCGTTCGACCACGCGTACAGCGCTCCATCATACGAAACGAACCCCGAAGCCTCCCTGGTTCCGGAAGCCGACTACGTTTGGCGCATCATCCTAATGTTCGGTGCTGTCCCCGCCGCTCTGACCTACTACTGGCGCATGAAGATGCCCGAAACGGCGCGTTACACGGCGCTCGTCGCCAAGAACGCCAAGCAAGCCGCGCAGGACATGTCCAAGGTGCTTCAGGTGGACATCCAAGCCGAGCAGGAAAAGGTGGACATCATCGTCCAGAGAGAAGCCAACACCTTCGGCTTGTTCTCCAAGGAGTTTCTCCGCCGACACGGCTTGCACTTGCTCGGCACAACCACTACCTGGTTCCTACTCGACATCGCTTACTACAGCTCCAACCTCTTCCAGAAAGACATCTACAGCAACATCGGTTGGCTCCCCCCCGCCAAGGAAATGAACGCCATTCAAGAAGTCTTCAGAGTTGCTAGGGCAACCGCGCTTATAGCCTTATGCGGTACGGTTCCAGGCTACTGGTTCACCGTCGCCTTTATCGATCACTTGGGTCGTTTCTTCATCCAAATCATGGGCTTCTTCTTCATGACTGTCTTCATGTTCGCCCTAGCCATCCCCTACCACCACTGGGCCAAAAAGGAACACAGGATAGGCTTTCTCGTTTTGTACGCTTTTACCTTCTTCTTTGCCAATTTCGGCCCCAACGCCACCACTTTCGTCGTGCCGGCCGAGATCTTCCCCGCCAGGCTGCGGTCCACGTGTCATGGGATTTCGTCGGCCGCAGGGAAGGCCGGCGCCATCGTGGGCGCGTTCGGCTTCCTTTATGCTTCTCAGGACAAGGATCCTAAGAAGCGGGACGCGGGTTACCCCGCGGGGATTGGGATGAAGAACACCCTCATTTTGCTGGCTGTGGTGAATTGTCTTGGCTTGTTTTTCACGTTCTTGGTTCCGGAATCTAAAGGGAAGTCCTTGGAGGAGTTGAGTGGGGAGAACGAAGATGAAGAAGGTAATAATCATCATGAGCAGCAACAGCAAGGTGCATCCTCTTCTGGTAGGACAGTTCCAGTTTAA 1632 0.5619 MARGEVGVLSALDAAKTQWYHFTAIVIAGMGFFTDAYDLFSIPNVTKLLGRIYYTHPGAPKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLALMVFSSLASGLSFGHSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIASVFAMQGFGILAGAVVSIVVATAFDHAYSAPSYETNPEASLVPEADYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAAQDMSKVLQVDIQAEQEKVDIIVQREANTFGLFSKEFLRRHGLHLLGTTTTWFLLDIAYYSSNLFQKDIYSNIGWLPPAKEMNAIQEVFRVARATALIALCGTVPGYWFTVAFIDHLGRFFIQIMGFFFMTVFMFALAIPYHHWAKKEHRIGFLVLYAFTFFFANFGPNATTFVVPAEIFPARLRSTCHGISSAAGKAGAIVGAFGFLYASQDKDPKKRDAGYPAGIGMKNTLILLAVVNCLGLFFTFLVPESKGKSLEELSGENEDEEGNNHHEQQQQGASSSGRTVPV 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01944 543 MobiDBLite consensus disorder prediction 510 543 - -
Cca04g01944 543 MobiDBLite consensus disorder prediction 510 527 - -
Cca04g01944 543 Gene3D MFS general substrate transporter like domains 20 532 IPR036259 -
Cca04g01944 543 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Cca04g01944 543 MobiDBLite consensus disorder prediction 528 543 - -
Cca04g01944 543 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 5 530 - -
Cca04g01944 543 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 5 530 - -
Cca04g01944 543 CDD MFS_PhT 25 507 - -
Cca04g01944 543 TIGRFAM 2A0109: phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cca04g01944 543 Coils Coil 511 531 - -
Cca04g01944 543 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Cca04g01944 543 Pfam Sugar (and other) transporter 27 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01944 Cca-Chr4 37816114 37822407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01944 1 543 Inorganic Solute Cotransporters AT2G32830 75.919 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01944 K08176 - rcu:8285033 844.343