Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01940 ATGGCCAAGTTCAAGAACAATGCCAAGAAGTTGTCCTACATCTCAGTTCCTTCTCAGATCATCAACTCCATCTCATCTTCTTCTCTTCAATCTCTACTTGAGTCCCCCAAGAAGTGTGCAAGGCACTCCAAGTTTCCCAAGTGCAGGAGCCCAAGACTCTTCCTTTTCACTCTTTTTTTCTTTGCCTTCTTAGCCATGCTCAAGTTTGGCTTCAATCTGGACACCCCATTTCCTCCCTTCCCGTGTGCAACCTCAAAACCCGAACTTGCAACTGCATCACACAAAGGTGGTGTTTTGGATGGTGCTGTGCCACAGCCTCTGATTTCCACTGTGCAGTTACATGCAGATTTTCCTCATGAAAGGGGTGAGGAGGTTGAAAAGAGTGAGTTTTGGGAGCAGCCAGATGGGTTGGGGTACAAGCCTTGTTTGGATTTCAGTAGGGAGTATAGGAGAGAGAGTGAAGGGGTTGTGAAGAACAGGAGGAGGTACCTCATGGTGGTGGTTTCTGGAGGGATGAATCAGCAGAGGAACCAGATTGTTGATGCTGTTGTTATTGCTAGGATTCTTGGGGCTGCTTTGGTTGTCCCCATATTGCAAGTCAATGTCATTTGGGGAGATGAAAGTGAATTTGCTGATATATTTGATTTGGAGCACTTCAAGAGTGTTCTTGCCAATGATGTGCGAGTGGTGTCAGCATTGCCATCAACACACCTAATGACAAGGCCTGTGGAGGGAAGCCCTCCACTTCATGTCACTCCCAGTTGGATTCGGTCACGCTATCTCAGAAGATTCAACAGAGAGGGCGTTTTGCTTTTACGTGGATTGGATTCAAGGCTGTCAAAGGATCTTCCTCCTGACCTTCAGAAGCTCCGATGCAAGGTTGCTTTTCATGCATTAAGATTTGCAAAGCCTGTTCAGGAACTTGGTAACAATATTGCTGAAAGAATGAAAAGCAAGGGACCCTACCTTGCTCTTCATCTGCGGATGGAAAAGGATGTCTGGGTGAGAACTGGTTGTCTACCTGGTTTGAGTGCTGAGTATGATGAGATTGTAAACAGTGAGAGGATACAACGGCCGGAGCTCCTGACAGCCAGATCAAACATGACTTACCATGAAAGGAAGCTGGCTGGCCTTTGCCCCTTAAATGCTATGGAGGTTACCAGGTAG 1167 0.4687 MAKFKNNAKKLSYISVPSQIINSISSSSLQSLLESPKKCARHSKFPKCRSPRLFLFTLFFFAFLAMLKFGFNLDTPFPPFPCATSKPELATASHKGGVLDGAVPQPLISTVQLHADFPHERGEEVEKSEFWEQPDGLGYKPCLDFSREYRRESEGVVKNRRRYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFADIFDLEHFKSVLANDVRVVSALPSTHLMTRPVEGSPPLHVTPSWIRSRYLRRFNREGVLLLRGLDSRLSKDLPPDLQKLRCKVAFHALRFAKPVQELGNNIAERMKSKGPYLALHLRMEKDVWVRTGCLPGLSAEYDEIVNSERIQRPELLTARSNMTYHERKLAGLCPLNAMEVTR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01940 388 Pfam GDP-fucose protein O-fucosyltransferase 163 366 IPR019378 -
Cca04g01940 388 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 11 388 - -
Cca04g01940 388 PIRSF UCP009360 18 388 IPR024709 -
Cca04g01940 388 PANTHER OS02G0726500 PROTEIN-RELATED 11 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01940 Cca-Chr4 37772782 37776594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01940 11 388 Miscellaneous Gene Families AT2G44500 64.885 3.36e-173 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01940 - - vun:114169624 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01940 04 37772782 37776594 Cca04g01940 04 37772782 37776594 ECH