Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca04g01939 | ATGGCAAATGGTTATGCAACAAAATTATCAGATTTCAGCTACGATGTTTTTCTGAGTTTTAGTGGCGGAGCCAGCAATGCTTTTGTTGATCCTCTATGTCGAGCTTTGCATCACAGAGGAATCAACATCTTCAGATCAGAAGATGGCAAAACCAGACCCGCCATTGAAGAAATTGAAAAATCCAAAATGGCAATGGTTGTGTTGTGTCACAACTATGCATTTTCCAAGGAGTCCCTTGATGAACTAGCCAAGATCAGTGAGTATGTTGACAATAAAAGAAAACAGGTTTGGGCAATTTTTTACAAAGTGGAACCATCAGATGTACGAAAACAAAAAAATTCCTATAAAAAAGCCATGGATGGTCATGAAATGAGATACGGAAAAAACTCGGAGAAGGTAAAAGCATGGGGGAATGCTTTGACTAGAGTATGCGATCTAAGCGGAATACATTTCAAGGATGATATGTTTGAAGCTGAACTTGAGAAGATTGTTGAAGCAGTGTTCTCTAAATTAGCTCCCGTGCCTGTACAAATGAACCATGTAGTTGGACTCGATTATCACTTTGAACAGGTGAAATCATTTTTAGATGTTGAGTCTAGTGATACCGTTCGCATGTTGGGAATTTATGGAGCTGGAGGAATAGGTAAAACTACACTTGCAGTCTATTTATATGAAAAGATTAGGCATTATTACTTTGAAGCTGCTAGTTTTCTGATTAAAGACAGAGAAAACCCAAACAAGAGCAATAATCTCTTGGAAGATCTTCAAAAGAAACTTTTATCTCTAATGGGCGTAGAGACAGAAACCATGATGGGGAGTACAAATAAAGGAGAACTTGAAATCAAACGCAGGCTTGGCCATAGAAGAGTTCTTCTAGTTTTGGATGATGTTGATACAAAAGAACAATTGGAATCACTGGTTGGAAAACTTAATTGGTTTGGTTCGGGTAGTAGGATCATTATAACAACAAGAGATGCAGCTGTGCTGGATTATGATAATGGAATTAAGAAATATAAAATGGAGGAGCTAAAAGATTGTGACGCACTTGAACTTTTTTGTTGGAATGCCTTTGATATGCCTGGACCTGCAAAAAACTTTGAAAATATTGCTCATCGTGCAATAGGTTATGCAAAGGGTGTCCCTTTGGCTTTACAAGTATTAGGATCCAATTTGAAAGGAAGAATCATAGAGGAATGGGAAATTGAATTGGGAAAATATAGGAAGGTTCCAAATGCTGAGATTCAAGGTGTCCTAGAAATAAGTTATTATAGCCTGCCTGAGCCTGAGATGAAAATATTCTTGGACATTGCTTGTTTTTTCAAAGGGGAGAAATCGAATTATGTTAAAAGGATATTGATGGCTTCTGATTTAAGTATTCAAGTACTTACTTCTAAATGTCTATTGATAGTTGATGAAAATGGTTGCTTGGAGATGCATGATCTAATACAAGACATGGGTAGAGAGGTTGTCAGGAAGGAATCACCATATAAACCTGGTAACCGCAGTAGATTATGGTCTCATGAAGATGTTCTTCAAGTACTGAAAGAAAACTCAGGAAGTAGTACAATAGAAGGAATAATGCTTCATCCCCCTAGGCTTGAAGAAGTAGAAAATTGGACTAATACCGCCTTTGAGAAGATGAAGAATCTCAGAATTCTTATTGTTCGGAATACAAAATTTTCAACAGGACCTAGTTATCTACCAAATAATTTACGACTCCTTGACTGGATTGGATTCCCATCGAAGTCTTTTCCACCTTCTTTTTATCCTGAGAATATCGTTGACTTCAAGTTATCTCATAGTCCTTTGGTATTGGAAAAGTCACTTGAAAAGGTATTTCAGGATTTGACTTTTGTCAATCTTTCCCATTGTCAGTTCATAACTCAAATACCGAACATGCATGGAGCTAAAAACTTAAGAGTATTGACAATTGACAAATGCCTTAAATTGGAAGGGTTTCATCAATCCATTGGGCATATGCCCAATCTTGTATACTTAAGTACATCAGAGTGTATCATGCTCAGGAGTTTTGTGCCAAGAATGTATTTGCCATCTCTGGAAATGCTTTCATTTAACTTTTGCAGTAAACTTGAAAAACTCCCAGAAGTAGTGAGAAAGATGGATAAACCATTAAAAATACACATGAAAAATACTGCTATTAAGAAGTTTCCGGATTCTATTTGTAAACTTACAGGGCTTGAGTATGTAGACATGTCAGCTTGCACAGGACTCAGAGATATATCAAGTTTTGTATCACTGCCAAAACTTGTCACGTTAAAGATGAATGGATGCTCTCAACTCGCAGAATCATTTAAAATGTTCAGAAAGAGCCTTTCTGAAGCAAATAGCCTGCCGAATTTAAAGGAATTACATTTAAGCAGGGCTAATCTGTCGTATGAAGATCTTTCCATAGTTCTTCATATATTTCCAGAATTGGAGTACTTGAATGTATCCCACAATGAAATTGAATCCATCCCAGAATGCATCAAAGGATCTTTGCAGTTGAAGAATCTTGATGTAAGTTTTTGCAGGAATCTTGGGGAAATTCCAGAACTTCCATCAAGTATTCAAAGAGTAAATGCAAGATACTGTCAATCCTTAACTATAGAGTCATCAAGAGTGCTGTTATCCAAGGTTTATAAAGAAATGGAGAGAATACATGTTGTGATGCCAAAAACTGGAATTCCAAAGGGGTTTCAATGTATTGACAGAGAAGATATTCCACTTTTTTGGGCTCGCCGGAAGTTCCCTGTTGTTGCTTTAGCATTTGTGTTTAGGGAAGTAAAAACTAAAGAGGATATACTGATGGATACCTCAGAATTGTTGCCTGGAGTTGTATCTGCTGAGGAGTCCTACACTGTCGGCCTGAACTTGTTTATAGGTGGCCAAGAAATCTGTTGCAAAGTTCACAATTACTGCAGTGTTGGGGATCATCACATGTTAGTATGTGATCTACAGGTTTTGTTTAATGATGAAGGGTGGAAGGGTCTTGATGCATATGTTGGAGATGACTGGAAAGCCATTCAAGTTCAATGTGAATCAACTTTGAGTCTGAGTCATTGGGGAGTTTATGTGTACAAGCAGAAAACAAACACTGATGATATTCTATTTAGTTTTCCCGATTCAACAAGTTTGGTTTCAAAAGCAAGTCCACAGAAGAAAACAAGACATATACAATGTTACGATGCAATAGAAAAATTTGGCCAGAACTTGAATTCATTTAAAATAGAACAAACTGCCTCAGTTGCAAACATGCTATTGAGATGGTGGAGGAATGCCAAGGCTAATATTAGAGGGGATGTTTCTGCCTCTACATATGACGCAAGTTTATTGCAAGAGCATGAAGATGTTGTCTGGGATCTGGCACACATTTTGGAGATGTTGATGGAAACATTGCCAAAACATACTAATTCAGAAGTTCAAAGAACAGGCCAATTGGTGGTTGAATTATTGGTTGCACAGGCACAACATATAAAGGAATATTACCATGAGAAGTTTCACTACAATCTAACTATGCCTATTATTCTAGTGGAATGTCAATGTCACCCTTGCACAGATTTAGAAAGAGCTCAAAGCCTTCGTTATTGGGGAACCGTGGAGCTAGAAGAAGGAGATCCACTTGTGTGGAAAATATGGAAGAGAAATGAAGCATTCAAGGAGAGGCTAAATTACACTGTTCTGTTGAAATGTGAGCATCATTCTACTAAGGAAGCTTCAAGCTCTAGCCATAGGGATTCCTTGGTGGAAGAATACAATGATCCTACATTGCAAGCATTGATGAGGAGGATAGAAGAAGATACTGCGAGGTTGAATAAATCTTATGCGAAGTTGAAGGCTTCTATTGTTCAAACGAATGTCCCAGTTTCTGAAAAATATCTTCTGGAAATGACAATCATTAGAGGTCTAGAAAGCTTGGGAAGATTAGGGTCTAATTTCTTCAAGACAACTTATGGGAAATTGAGGATGGAGCATGATGCTCATAGCACTACTCATGTGCAGCATGAGTTAAGGATGGACCATGGTGCTCAAAGCTCTACTTTGAATAAGGAGCAACATAAGTTGGGGGTGGAGCATGATGCTCAGAATTCTAATCAGGAAAAGAATAACTTGGTTTGGATCAGATTATTATTTGGTAGATTTTGGAGGCAAAGATAG | 4155 | 0.3759 | MANGYATKLSDFSYDVFLSFSGGASNAFVDPLCRALHHRGINIFRSEDGKTRPAIEEIEKSKMAMVVLCHNYAFSKESLDELAKISEYVDNKRKQVWAIFYKVEPSDVRKQKNSYKKAMDGHEMRYGKNSEKVKAWGNALTRVCDLSGIHFKDDMFEAELEKIVEAVFSKLAPVPVQMNHVVGLDYHFEQVKSFLDVESSDTVRMLGIYGAGGIGKTTLAVYLYEKIRHYYFEAASFLIKDRENPNKSNNLLEDLQKKLLSLMGVETETMMGSTNKGELEIKRRLGHRRVLLVLDDVDTKEQLESLVGKLNWFGSGSRIIITTRDAAVLDYDNGIKKYKMEELKDCDALELFCWNAFDMPGPAKNFENIAHRAIGYAKGVPLALQVLGSNLKGRIIEEWEIELGKYRKVPNAEIQGVLEISYYSLPEPEMKIFLDIACFFKGEKSNYVKRILMASDLSIQVLTSKCLLIVDENGCLEMHDLIQDMGREVVRKESPYKPGNRSRLWSHEDVLQVLKENSGSSTIEGIMLHPPRLEEVENWTNTAFEKMKNLRILIVRNTKFSTGPSYLPNNLRLLDWIGFPSKSFPPSFYPENIVDFKLSHSPLVLEKSLEKVFQDLTFVNLSHCQFITQIPNMHGAKNLRVLTIDKCLKLEGFHQSIGHMPNLVYLSTSECIMLRSFVPRMYLPSLEMLSFNFCSKLEKLPEVVRKMDKPLKIHMKNTAIKKFPDSICKLTGLEYVDMSACTGLRDISSFVSLPKLVTLKMNGCSQLAESFKMFRKSLSEANSLPNLKELHLSRANLSYEDLSIVLHIFPELEYLNVSHNEIESIPECIKGSLQLKNLDVSFCRNLGEIPELPSSIQRVNARYCQSLTIESSRVLLSKVYKEMERIHVVMPKTGIPKGFQCIDREDIPLFWARRKFPVVALAFVFREVKTKEDILMDTSELLPGVVSAEESYTVGLNLFIGGQEICCKVHNYCSVGDHHMLVCDLQVLFNDEGWKGLDAYVGDDWKAIQVQCESTLSLSHWGVYVYKQKTNTDDILFSFPDSTSLVSKASPQKKTRHIQCYDAIEKFGQNLNSFKIEQTASVANMLLRWWRNAKANIRGDVSASTYDASLLQEHEDVVWDLAHILEMLMETLPKHTNSEVQRTGQLVVELLVAQAQHIKEYYHEKFHYNLTMPIILVECQCHPCTDLERAQSLRYWGTVELEEGDPLVWKIWKRNEAFKERLNYTVLLKCEHHSTKEASSSSHRDSLVEEYNDPTLQALMRRIEEDTARLNKSYAKLKASIVQTNVPVSEKYLLEMTIIRGLESLGRLGSNFFKTTYGKLRMEHDAHSTTHVQHELRMDHGAQSSTLNKEQHKLGVEHDAQNSNQEKNNLVWIRLLFGRFWRQR | 1384 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca04g01939 | 1384 | ProSiteProfiles | Leucine-rich repeat profile. | 811 | 832 | IPR001611 | GO:0005515 | |
Cca04g01939 | 1384 | Coils | Coil | 1260 | 1280 | - | - | |
Cca04g01939 | 1384 | Pfam | TIR domain | 14 | 172 | IPR000157 | GO:0007165 | |
Cca04g01939 | 1384 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 174 | 436 | IPR027417 | - | |
Cca04g01939 | 1384 | Gene3D | - | 171 | 335 | IPR027417 | - | |
Cca04g01939 | 1384 | SUPERFAMILY | L domain-like | 478 | 864 | - | - | |
Cca04g01939 | 1384 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 19 | 1051 | IPR044974 | GO:0006952 | |
Cca04g01939 | 1384 | SMART | till_3 | 13 | 146 | IPR000157 | GO:0007165 | |
Cca04g01939 | 1384 | PRINTS | Disease resistance protein signature | 205 | 220 | - | - | |
Cca04g01939 | 1384 | PRINTS | Disease resistance protein signature | 284 | 298 | - | - | |
Cca04g01939 | 1384 | PRINTS | Disease resistance protein signature | 377 | 391 | - | - | |
Cca04g01939 | 1384 | PRINTS | Disease resistance protein signature | 751 | 767 | - | - | |
Cca04g01939 | 1384 | Pfam | NB-ARC domain | 185 | 400 | IPR002182 | GO:0043531 | |
Cca04g01939 | 1384 | Gene3D | - | 342 | 426 | IPR042197 | - | |
Cca04g01939 | 1384 | ProSiteProfiles | TIR domain profile. | 12 | 171 | IPR000157 | GO:0007165 | |
Cca04g01939 | 1384 | Gene3D | Ribonuclease Inhibitor | 713 | 879 | IPR032675 | - | |
Cca04g01939 | 1384 | Gene3D | Ribonuclease Inhibitor | 528 | 712 | IPR032675 | - | |
Cca04g01939 | 1384 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 19 | 1051 | - | - | |
Cca04g01939 | 1384 | Gene3D | - | 9 | 170 | IPR035897 | - | |
Cca04g01939 | 1384 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 9 | 148 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca04g01939 | Cca-Chr4 | 37743329 | 37748841 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca04g01939 | 2 | 820 | WRKY Transcription Factor Family | AT4G12020 | 29.446 | 6.82e-75 | 273 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca04g01939 | - | - | gmx:100801337 | 2050.79 |