Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01930 ATGATTGAGACACtcttgttcctcttcctcttgtcccttgttctaacatacgccttcttcttcttctcttcttcCACTAAGAATCTCCACCTTCCACCAAGTCCTCCAAGCGTTCCCCTACTGGGccacctccacctcctctctccatccctccacaactctctccacgccctctcctccaagcacggccctctcctcctcctccgcctcggcccctcccgccgcctcctggtcgcctcctcGGCCGCGCTCGCCGCCGCCCTCTTCACGACCCACGACCTGGCCTTCTCCTCGCGCCCCGCCTTCGCCTTTGCGGAGAAGCTCCCCTTCGGCAGCGCCGGCTTCATCACCGCCCCCTATGGGCCCTACTGGCGCTTCATGAAGAGGCTTTGCATGACGGAGCTTCTCTCCGCGCGCCAGCTGGAGCGCTCCAAGAGGGTGAGGAGGGAAGAGATTGAGCGTTCCCTCAGAAATGTGTTGGAGAAGGCTCGGGACTGTGTTGCCCTTGACTTGGGCTCTCACTTCATGAAATTCACCAATAATGTCACTTGCAGGATGGCAATGAGCACCAGTTGTTCGGATAACTGCGAGGATGCTGAGAGGATCAGGAAGCTGGTAAAGGAGACCTTTGAGCTAGCTGCGAAGCTTTGCTTTGGAGATGTGTTGGGCCCTCTCAAGATGTTGAGTTTCTGGGTTTATGGGAAAAGGGCTTTGGATGTGAGCACAAGGTACGATGAATTGTTGGAGAAGGTGCTCAAGGAACATGAACACAAAAGATTATCAAGTGGAAATGAGCATTCTGGTGATGAAAGTGAAAGGGATTTGATGGATATTCTATTAGATGTTTACCATGATGCTCATGCAGAGTTCAAGATCACAAGGACTCATATTAAAGCCTTCTTTCTGGACCTCTTCATTGGAGGCACAGAAACATCAGCAGAAGCAATGCAATGGGCAATGGCTGAGCTCCTTAACCACCCTGAAGCATTTCAAAGGGTGAGAAAGGAGATAGAGTTAGTCACAGGCAATGGTAGGCTAGTTGAAGAATCAGATATCCCAAACATGCCATATTTGCAAGCAGTTGTGAAGGAAACACTAAGACTTTATCCACCAGGGCCAGTCACAACAAGAGAGTGTCGCCAACACTGCAAAATAAACGGCTTTGATGTGCCACCAAAAACAGCAGTGGCAATAAACTTGTATGCCATAATGAGGGACCCTGATTCTTGGGACCATCCAAATGAGTTTATCCCTGAAAGGTTCTTGCAAGAACAAGATGAGGATTGTTTAAGTGATGATGGTAAGAGAATGAAGTTCAATTTTGTGGCATTTGGAGGTGGAAGGAGAGGGTGTCCTGGGACAACACTGGCATTCAGCTTGATGAACACTGCAATTGCTGCCATGGTGCAGTGCTTTGATTGGAGAATTGGTGAAGATGGAAAAGGTGCAAAGGTTGATATGCAATCAGGCTCTGGCATGTCGTTGACCATGGCTCACCCCCTTATTTGTCTTCCCGTGCTACATTTTAACCCTTATGATGTATAA 1545 0.4291 MIETLLFLFLLSLVLTYAFFFFSSSTKNLHLPPSPPSVPLLGHLHLLSPSLHNSLHALSSKHGPLLLLRLGPSRRLLVASSAALAAALFTTHDLAFSSRPAFAFAEKLPFGSAGFITAPYGPYWRFMKRLCMTELLSARQLERSKRVRREEIERSLRNVLEKARDCVALDLGSHFMKFTNNVTCRMAMSTSCSDNCEDAERIRKLVKETFELAAKLCFGDVLGPLKMLSFWVYGKRALDVSTRYDELLEKVLKEHEHKRLSSGNEHSGDESERDLMDILLDVYHDAHAEFKITRTHIKAFFLDLFIGGTETSAEAMQWAMAELLNHPEAFQRVRKEIELVTGNGRLVEESDIPNMPYLQAVVKETLRLYPPGPVTTRECRQHCKINGFDVPPKTAVAINLYAIMRDPDSWDHPNEFIPERFLQEQDEDCLSDDGKRMKFNFVAFGGGRRGCPGTTLAFSLMNTAIAAMVQCFDWRIGEDGKGAKVDMQSGSGMSLTMAHPLICLPVLHFNPYDV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01930 514 Gene3D Cytochrome P450 21 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PANTHER CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 25-RELATED 6 512 - -
Cca04g01930 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cca04g01930 514 SUPERFAMILY Cytochrome P450 26 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 Pfam Cytochrome P450 32 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01930 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01930 Cca-Chr4 37596839 37600172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01930 1 512 Cytochrome P450 AT2G42250 46.693 7.16e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01930 K23814 - gmx:100790065 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01930 04 37596839 37600172 Cca04g01930 04 37596839 37600172 ECH