Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01924 ATGGCTCAGAAGGCAGAGAAAAACGACGCCGAATTCAAGGTCCCCGAACCCATCACCCCCTGCACCCCCACCCCCATTCCCGAACCTTCCAGATTCTTCCCCGCCACCTCATCGCGCTCGCCCAAGCGGCCCCTCCCCGCCGATTCCCACGACCCCGCCGCCGCCGACCAGATTCCGTCTTCCGACCCCAAGCGCGCCGTCAACCGCTGCTCCGNNNNNNNNNNNNNNNNCCGCTGCCGCTGCGGCGACCTCTTCTGCGCCGAGCACCGCTACTCCGACCGCCACGACTGCTCCTACGACTACAAGGCCGCCGGCCGAGAGGCCATCGCCAGGGAGAACCCCGTCGTCAAGGCCGCCAAGATCGTGAAAGTCTGA 375 0.6427 MAQKAEKNDAEFKVPEPITPCTPTPIPEPSRFFPATSSRSPKRPLPADSHDPAAADQIPSSDPKRAVNRCSXXXXXXRCRCGDLFCAEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVKV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01924 124 Gene3D - 40 120 IPR035896 -
Cca04g01924 124 MobiDBLite consensus disorder prediction 1 67 - -
Cca04g01924 124 SUPERFAMILY AN1-like Zinc finger 56 118 IPR035896 -
Cca04g01924 124 SMART AN1_Zf_4 66 102 IPR000058 GO:0008270
Cca04g01924 124 PANTHER AN1-TYPE ZINC FINGER PROTEIN 36 124 - -
Cca04g01924 124 PANTHER AN1-LIKE ZINC FINGER PROTEIN 36 124 - -
Cca04g01924 124 Pfam AN1-like Zinc finger 70 102 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01924 Cca-Chr4 37431048 37431422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01924 78 124 C2H2 Transcription Factor Family AT3G52800 61.702 1.29e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01924 - - ccaj:109792650 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01924 04 37431048 37431422 Cca04g01924 04 37431048 37431422 ECH