Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01921 ATGTGTCACTCTCCAATGTTTTTCTTTCCTTTCCATCGAAACAGTGCATTTATATATAGCAGTTATCAGAGCAAGAAAGAAGGCTTGATGATAATTAATATGGAAGAAAGCAAAGGGAGAGTGTGTGTTACAGGTGGTACAGGGTTTATTGGTTCATGGATTATCAAAAGGCTCCTACAAGATGGTTACTATGTTAGCACCACTGTGAGATCAGATCCAGAGCACAAGAAGGATGTTAGTTTTTTAACCAGCTTACCAGGAGCATCTCAAAGGCTACAAATTCACAGTGCTGATCTCAGCAATCCAGAAAGTTTCAATGCAGCCATTGAAGGGTGCATTGGAGTTTTCCATGTAGCTACCCCAGTTGACTTTGAATTAGATGAACCTGAGGAGGTAGTGACCAAAAGATCCATTGATGGTGCACTTGGCATTTTGAAGGCATGCCTCAATTCCAAGACTGTGAAACGAGTTGTTTACACCTCTAGTGCCTCTGCTGCGGCTTTCAATAACAAGGAAGTGTTGGATGAAAGCTGTTGGAGCGACGTGGATAGTCTTAGAGCTTCAAAGCCATTTGGTTGGTCCTATGCGGTTTCAAAGACATTGACAGAAAAGGCAGTGCTTGAATTTGGAGAACAAAATGGATTGGATGTTGTCACACTAATTCCAACTTTTGTGTTTGGACCCTTCATTTGTCCAAAGCTTCCTAGCTCGGTTCAAGCTTCCTTGTGTTTTGCATTTGGAGGAAAAAGTGCCTTTGGTTTCATAATTCAAACACCTATGGTGCATGTAGATGACGTGGCTAGAGCACATATATTTCTGCTGGAACATCCTAATCCAAAAGGGAGGTATAGTTGTTCACAGTGTCTGGTAACTTTTGAAAGAATCTCTGAACTTGTTTCTGCCAAATATCCAGAATTTCAACTAGAGACAGTAGACTCGTCCAAGCAAATTGAAGGTATCAAGATACAAGATTTGTCTTCAAAGAAACTGAAAGATGCTGGATTTGTGTTCATGTACGGACTTGAGGAAATGCTTGATGATGCAATCCAATGCTGCAAACAAAAAGGGTTACCTGTGAGGTAG 1083 0.41 MCHSPMFFFPFHRNSAFIYSSYQSKKEGLMIINMEESKGRVCVTGGTGFIGSWIIKRLLQDGYYVSTTVRSDPEHKKDVSFLTSLPGASQRLQIHSADLSNPESFNAAIEGCIGVFHVATPVDFELDEPEEVVTKRSIDGALGILKACLNSKTVKRVVYTSSASAAAFNNKEVLDESCWSDVDSLRASKPFGWSYAVSKTLTEKAVLEFGEQNGLDVVTLIPTFVFGPFICPKLPSSVQASLCFAFGGKSAFGFIIQTPMVHVDDVARAHIFLLEHPNPKGRYSCSQCLVTFERISELVSAKYPEFQLETVDSSKQIEGIKIQDLSSKKLKDAGFVFMYGLEEMLDDAIQCCKQKGLPVR 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01921 360 PANTHER VESTITONE REDUCTASE-LIKE 39 350 - -
Cca04g01921 360 Gene3D - 38 357 - -
Cca04g01921 360 CDD FR_SDR_e 41 335 - -
Cca04g01921 360 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 39 350 - -
Cca04g01921 360 Pfam NAD dependent epimerase/dehydratase family 41 279 IPR001509 -
Cca04g01921 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 32 353 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01921 Cca-Chr4 37346861 37349489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01921 30 358 Miscellaneous Gene Families AT4G27250 34.971 1.32e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01921 - K13265 gmx:100796029 572.007