Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01919 ATGGAAGAAAGCAAAGGAAGAGTGTGTGTTACAGGAGGCAACGGATTTATTGGTTCATTGTTTGTGAAGAGGCTTCTGGAAGATGGTTACTCTGTTAACACCACTGTGAGACAAAACCCAGTAGAACACAGGAAAGATGTTAGCTTTCTTACCAGCTTATCTGGAGCATCCCAAAGGCTACAAGTTTTCAGCGCTGATCTCAGCAATCCAGAAAGTTTCAGTTCAGCAATTGAAGGGTGTGTTGGAGTTTTTCACCTTGCTACCCCAATTGACTTTGAACAAAGAGAACCTGAGGAAATAGTGACCAAAAGATGCATTGATGGTGCACTAAGCATTTTGAAGGCATGCCTCAGTTCCAATACTGTGAAGAGAATTGTTTACACTTCTAGTGTCGCTGCTGTGATTTGCAATGGCAAAGAAGAACACGTGATGGATGAAAGCTTTTGGAGCGACCTGAATTATCTTCGTTCTTCAAAGATGTTGAAATGGTCGTATGCAATCTCTAAGACATTGACAGAAAAGGCAGTACTTGAATTCGGAGAAAAGAATGGATTGGATGTTGTGACAGTTGCTCCAGCTTTGGTTCTTGGACCCTTCATTTGTCCTAAGCTTCCAAGTTCAGTTTCTGATGCATTGAATCTTGCATTTGGTGACAGAGATCAATTTGCCTTAAATTCTCGGATACCTATGGTGCATGTGGAAGATGTGGTTAGAGCACATATATTTCTGCTTGAACATCCTGATCCAAATGGGAGGTACATAATTTCATCATGTAATGAAGCTGTTGAAAGGATATATGAACTTGTTTCTGCCAAATACCCAGAGTTTCAACAACGAACAGCAGACTCGTTAAAACAAATTGAAGGTATCAGGCTACCAGATTTGTCGTCAAAGAAGCTCATAGATGCTGGATTCATGTTCAAATATGGACTTGAAGAAATGCTTGATGACACAATTCAATGCTGCAAAGAAAAAGGTTACCTATGA 987 0.4032 MEESKGRVCVTGGNGFIGSLFVKRLLEDGYSVNTTVRQNPVEHRKDVSFLTSLSGASQRLQVFSADLSNPESFSSAIEGCVGVFHLATPIDFEQREPEEIVTKRCIDGALSILKACLSSNTVKRIVYTSSVAAVICNGKEEHVMDESFWSDLNYLRSSKMLKWSYAISKTLTEKAVLEFGEKNGLDVVTVAPALVLGPFICPKLPSSVSDALNLAFGDRDQFALNSRIPMVHVEDVVRAHIFLLEHPDPNGRYIISSCNEAVERIYELVSAKYPEFQQRTADSLKQIEGIRLPDLSSKKLIDAGFMFKYGLEEMLDDTIQCCKEKGYL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01919 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 320 - -
Cca04g01919 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 323 IPR036291 -
Cca04g01919 328 Pfam NAD dependent epimerase/dehydratase family 8 249 IPR001509 -
Cca04g01919 328 PANTHER VESTITONE REDUCTASE-LIKE 6 320 - -
Cca04g01919 328 CDD FR_SDR_e 8 305 - -
Cca04g01919 328 Gene3D - 5 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01919 Cca-Chr4 37235889 37237817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01919 4 328 Monolignol Biosynthesis Gene Families AT2G02400 36.280 5.40e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01919 - K13265 gmx:100796029 473.396