Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01871 ATGGCGAGCAACGGCACCAATACGACGTCGTCTAGGTTTTCGTTTCTCAACCGCTCCCTGACGACGGTTAGCAAGGAAAAGCCGCCGCAAAAGCCGCCGCAGCTGGACCGTTCGCTCACGAAGTTCGTGGCATCCGCGCGCGGCGGCGTCGTGAAGAGGCTATGCAATTTCTTCGAATCGCCGAAGCCTTCGTCCTCGGAGTCTCCCAAACTCAGAGGCTCGAAATCGATCGAAAACTCCGATTCTCCGACGAAACCGCTCGATCCGGCGGCGAAATCGGTGGATTCCGCGTCGGTGATTCGGCTGCCAGGCACGGAGGATCGGATCGTGTTGTATTTCACGAGTCTGCGAGGGATTCGGAGGACCTACGAGGATTGCTACGCGGTTCGGAACATATTTCGGGGATTTAGGGTTTGGGTGGACGAGCGCGACATTTCGATGGACGCGAATTACCGGAAGGAGTTGATGAGCGTGTTGGGGGAGAACAACAAGAGGAAGGGACACGTGGCGCTCCCTCAGGTGTTCATAAGAGGGAGACACGTGGGCGGCGCTGACGTCATCCGGTACATGTTCGAGGTTGGGGAGTTGGCGAAGGTTCTGGAAGGCTTGCCGCGGACCAAGGGAGGGTTCGTGTGCGAGAGTTGCGGGGATGTGAGGTTCGCCCCGTGTGGGAATTGCAGTGGGAGTAGGAAGGTGTTTGATGAGGATGAAGGGGTGTTGAAGAGTACTGAGGAGTGTTTCTCCGCAAGGCAATGTTCCGAATTGCTTCAATTCAGCATGTCAAAATGCGAAAATGGCACGTGTCTGTGA 810 0.5642 MASNGTNTTSSRFSFLNRSLTTVSKEKPPQKPPQLDRSLTKFVASARGGVVKRLCNFFESPKPSSSESPKLRGSKSIENSDSPTKPLDPAAKSVDSASVIRLPGTEDRIVLYFTSLRGIRRTYEDCYAVRNIFRGFRVWVDERDISMDANYRKELMSVLGENNKRKGHVALPQVFIRGRHVGGADVIRYMFEVGELAKVLEGLPRTKGGFVCESCGDVRFAPCGNCSGSRKVFDEDEGVLKSTEECFSARQCSELLQFSMSKCENGTCL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01871 269 SUPERFAMILY Thioredoxin-like 104 201 IPR036249 -
Cca04g01871 269 CDD GRX_GRX_like 108 254 - -
Cca04g01871 269 ProSiteProfiles Glutaredoxin domain profile. 97 207 - -
Cca04g01871 269 Gene3D Glutaredoxin 104 202 - -
Cca04g01871 269 MobiDBLite consensus disorder prediction 60 93 - -
Cca04g01871 269 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 9 246 - -
Cca04g01871 269 MobiDBLite consensus disorder prediction 60 83 - -
Cca04g01871 269 PANTHER GLUTAREDOXIN (GRX) FAMILY PROTEIN 9 246 - -
Cca04g01871 269 MobiDBLite consensus disorder prediction 1 28 - -
Cca04g01871 269 MobiDBLite consensus disorder prediction 1 39 - -
Cca04g01871 269 Pfam Glutaredoxin 110 181 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01871 Cca-Chr4 35598281 35599874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01871 K17479 - gmx:100779952 379.793