Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01851 ATGGACACGGATAGTAGCACGCCAGCACTTTACAACAAGGAGGAGCTGGGAGGTAACAAAAGGAAGAAGAAAATAGTGGACAACATGGGGCGAAGAAGGAAAGAGTGTGTGGAGATAGCAGAAAGCTTACGATGGCTAGCAGAAGCTATGGTAAGGTCAGAACAAGCGAGAATGGAGACAGTGAAGGAGATAGAGAGGATGAGAGTCGAAGCTGAGGCCAAACGAGGGGAAATGGATCTTAAGAGAACTGAAATAATTGCCAATACACAGTTAGAGATTGCTAGGATCATTGCTAGTGTCAACAACAATAAAGGTGTTGATTCTTCCTTGAGAATTGGAACAAGTTAG 348 0.4397 MDTDSSTPALYNKEELGGNKRKKKIVDNMGRRRKECVEIAESLRWLAEAMVRSEQARMETVKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIIASVNNNKGVDSSLRIGTS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01851 115 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 111 IPR044823 -
Cca04g01851 115 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01851 Cca-Chr4 34620646 34620993 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01851 - - ccaj:109792241 222.631