Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01825 ATGGCGAACGCAGCGTTTCGGAACGTGAAGGTGCCTCCGAACTCGGCGAGTCTGGAGGAAGCGCGTCAGCGAGTGTTCGATTTCTTCCGCAAAGCTTGCAGATCGCTTCCCTCCCTTCGCTCCACCGTCGCCTCCGAGATCCGCAAGAACACTCACGTCACCAATCCCAAAGTGATTGATATGCTGCTTTTCAAGGGGATGGAAGAGCTGAAGAACGTTGTGGACCATTCAAAGCAGAGGCATCATATCATTGGTCAGTACGTAGTTAGACAGCAAGGGCAAGGGCAAGTGGAAGGCTCAAAAGACCATGGCATATCTCCTTTTCTGAAGAATTTCTACAACGGCAATTACTTCTGA 357 0.5098 MANAAFRNVKVPPNSASLEEARQRVFDFFRKACRSLPSLRSTVASEIRKNTHVTNPKVIDMLLFKGMEELKNVVDHSKQRHHIIGQYVVRQQGQGQVEGSKDHGISPFLKNFYNGNYF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01825 118 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT 6 38 IPR016488 -
Cca04g01825 118 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT 39 118 IPR016488 -
Cca04g01825 118 CDD Complex1_LYR_NDUFA6_LYRM6 18 79 IPR045299 GO:0005747
Cca04g01825 118 PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 6-LIKE 39 118 - -
Cca04g01825 118 PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 6-LIKE 6 38 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01825 K03950 - gmx:100499925 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01825 04 33946691 33949433 Cca04g01825 04 33946691 33949433 ECH