Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01816 ATGGCACCGAAACAAAACAAGAAGCGTCTCTTCTCTACGGAAGAACCATCCACAGCGACAGCCACAGCCACCGAAGCACCAGCGGCACAAGAGTGTTGTTCTCCCAAAGTGAAGGCCAAGCGGGTGACGAAGAAGAAGGCAAGCAGCGACGAAGAGACGGAGGAGGACAGGATAAAGGCCCCGGATGGGCAGTCGAAGCTGTTCCAGAGGATCTGGAGCGAGGAAGACGAGGTCTTGATTCTGAAGGGCATGGCCGAGTTCATCTCAAGCACCGGCAACGACCCTTACAAGCACGCAGACTCCTTCCACGATTCCATCAAGAACATGCTCCACGTGGCAGCCTCCATCAACCAGCTCAAGGAGAAGATCCGCCGCTTGAAGAAGAAGTTCGAGGCTAATTCTCGCCGAGGGAAGAACGGCGACGACCCCCACTTCTCCAAACCTCACGACTCCACGATGTTTCACTTGTCCAAGATGGTCTGGGCTGTGAAGCCCAGGCCCAGTGAGAAACAATTGGTGACGGTGAAGTCTCTTATGGGTAATGACCTAGATTCGCTTTACCTCGAAATAGCTGGTATGAAGGAACTGGGTGAGGATGAGATGAAGAAGGGTTTGGCATTGATTGGAGAGTCCAAGAGGAAAGAGTTGGAGGGAAGGTGGAGCCAACTGCGTCTTGCTCAGCTTCAGCTTGTTTCAGATCGTTCCCAACTCACCGGGGAGATCGTTAAGCTGATACATGAAGCGCTTCACTGA 753 0.5312 MAPKQNKKRLFSTEEPSTATATATEAPAAQECCSPKVKAKRVTKKKASSDEETEEDRIKAPDGQSKLFQRIWSEEDEVLILKGMAEFISSTGNDPYKHADSFHDSIKNMLHVAASINQLKEKIRRLKKKFEANSRRGKNGDDPHFSKPHDSTMFHLSKMVWAVKPRPSEKQLVTVKSLMGNDLDSLYLEIAGMKELGEDEMKKGLALIGESKRKELEGRWSQLRLAQLQLVSDRSQLTGEIVKLIHEALH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01816 250 MobiDBLite consensus disorder prediction 12 27 - -
Cca04g01816 250 Coils Coil 109 136 - -
Cca04g01816 250 PANTHER STOREKEEPER PROTEIN 12 249 - -
Cca04g01816 250 MobiDBLite consensus disorder prediction 44 61 - -
Cca04g01816 250 Pfam Protein of unknown function, DUF573 68 161 IPR007592 GO:0006355
Cca04g01816 250 PANTHER BNAANNG10740D PROTEIN-RELATED 12 249 IPR007592 GO:0006355
Cca04g01816 250 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01816 Cca-Chr4 33790360 33791545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01816 6 164 GeBP Transcription Factor Family AT1G61730 35.928 1.65e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Cca04g01816 DUF573 5.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01816 - - ccaj:109806637 430.639